The 3 musketeers of food borne infections

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The 3 musketeers of food borne infections
The 3 musketeers of food borne infections:
     Salmonella, Campylobacter and
  Shiga toxin producing Escherichia coli
Prof. dr. ir. Mieke Uyttendaele
Lab of Food Microbiology and Food Preservation
Dept. Food Safety & Food Quality
Faculty of Bio-Science Engineering
Ghent University, Belgium
www.foodscience.ugent.be/LFMFP
www.itpfoodsafety.ugent.be www.UGent.be

        Symposium Voedselveiligheid – Salmonella Campylobacter STEC 12/03/2015, Bunnik, Nl
The 3 musketeers of food borne infections
The 3 musketeers… or was it 4 of them?

                                                                               Escherichia coli
                                                           Salmonella

                                                        Campylobacter jejuni    Listeria monocytogenes
        Athos, Porthos, Aramis
         friends of d’Artagnan                              De “big four” in food safety
(central character in book by Alexandre Dumas)

Symposium Voedselveiligheid – Salmonella Campylobacter STEC 12/03/2015, Bunnik, Nl
Mieke Uyttendaele www.foodmicrobiology.UGent.be
The 3 musketeers of food borne infections
Salmonella, STEC, Campylobacter : zoonotic
  pathogens need a farm to fork approach.
They may persist in the animal reservoir and spread
  to other sources, the origin of food borne
  transmission to human.
The 3 musketeers of food borne infections
Salmonella
                                                      vs
                                                 Campylobacter
                                                      vs
                                                    STEC
  -     History
  -     Taxonomy, reservoirs, associated foods
  -     Legislation, action limits
  -     Detection methods
  -     Growth and survival

Symposium Voedselveiligheid – Salmonella Campylobacter STEC 12/03/2015, Bunnik, Nl
Mieke Uyttendaele www.foodmicrobiology.UGent.be
The 3 musketeers of food borne infections
History of Salmonella
1885: discovery of the Salmonella cholerae suis,
causing “swine plague” by Theobald Smith, Salmon's
research assistant at Veterinary Division of USDA
1888: outbreak of gastroenteritis in humans
associated with red meat
1926-1936: Kauffmann-White Scheme for serotyping
(based on O & H antigen)

Interreg III “Beheers de voedselketen” slotconferentie   Turnhout, 13 december 2007
Belang van voedselveiligheid in de keten                        Prof. M. Uyttendaele
The 3 musketeers of food borne infections
History of Campylobacter
   1913: Vibrio-like bacteria in foetal tissue of aborted
   sheep
   1940s: Vibrio fetus, Vibrio jejuni, Vibrio coli
   1963: the genus Campylobacter
   1970s: isolation method optimized by Butzler, first
   isolation from stool samples of patients with diarrhea
   1980s: new campylobacters identified and
   Campylobacter recognized as most frequent
   cause of human bacterial enteritis
   1991: Vandamme et al. : Revision of Campylobacter,
   Helicobacter, and Wolinella Taxonomy: Emendation
   of Generic Descriptions and Proposal of Arcobacter
   gen. nov.".
Symposium Voedselveiligheid – Salmonella Campylobacter STEC 12/03/2015, Bunnik, Nl
Mieke Uyttendaele www.foodmicrobiology.UGent.be
The 3 musketeers of food borne infections
History of Shiga-toxin producing E. coli
1885: the German-Austrian pediatrician Theodor
Escherich discovered it in the feces of healthy
individuals and called it Bacterium coli commune
because it is found in the colon
1982: two hemorrhagic colitis outbreaks in US
with STEC O157 due to undercooked hamburgers
1996: , radish sprouts were associated with the
largest recorded outbreak of E. coli O157:H7 in Japan
associated with radish sprouts (6000 cases)
2003: Karmali et al. & the seropathotype approach
O157, O26, O103, O145, O111
2011: E. coli O104:H4 outbreak in Germany with
   fenugreek seeds (3968 ill, 900, HUS, 55 died)
The 3 musketeers of food borne infections
EFSA report on Trends & Sources of Zoonoses,
Zoonotic Agents and Food borne outbreaks in 2013
Salm: 85,268 vs Campy: 214,779 vs VTEC: 6112 cases

     Food
     borne
   outbreaks

          Interreg III “Beheers de voedselketen” slotconferentie   Turnhout, 13 december 2007
    published in van
          Belang 2015voedselveiligheid in de keten                        Prof. M. Uyttendaele
The 3 musketeers of food borne infections
Salmonella
                                                      vs
                                                 Campylobacter
                                                      vs
                                                    STEC
  -     History
  - Taxonomy, reservoirs, associated
    foods
  - Legislation, action limits
  -     Detection methods
  -     Growth and survival

Symposium Voedselveiligheid – Salmonella Campylobacter STEC 12/03/2015, Bunnik, Nl
Mieke Uyttendaele www.foodmicrobiology.UGent.be
The 3 musketeers of food borne infections
Salmonella enterica subsp. enterica
                           • Family Enterobacteriaceae
                              • Rod-shaped, motile

                     Intestinal tract of (farm) animals (and also
      Salmonella       reptiles and amphibians and rodents!)

 • Mostly associated with eggs/bakery and meat (pork / poultry)
 • Increasingly reported in low water activity foods, foods of non
       animal origin (leafy greens, herbs, melons, tomatoes)

    • Gastroenteritis (diarrhea, fever, nausea and abdominal
        cramps; may lead to hospitalization of young/old)
                    • Infective dose: 10-106

                     • More than 2500 serotypes
  Top 5 serotypes in EU targeted in animal production (farm): S.
   Enteritidis, S. Infantis, S. Hadar, S. Typhimurium, S. Virchow
Microbiological criteria
 EU Reg. 2073/2005

                           ITP Food Safety Prof. Mieke Uyttendaele - 7 sept. 2009 Ghent University
Salmonella enterica subsp. enterica
 2000 serotypes
e.g. S. Panama (melons, US 2011 – fresh juices US 2008)
e.g. S. Hadar (turkey burger, US 2010-2011)
e.g. S Bareilly (soy sprouts, UK 2010)
e.g. S. Typhimurium (beef, France, 2010 - pork Denmark 2008 –
                           Peanut Butter, US 2008)
e.g. S. Braenderup (pastueriz. Milk, US 2010)
e.g. S. Hvittingfoss (fresh vegetables, US 2010)
e.g. S. Mbandaka (eggs, Austria 2010)
e.g. S. Montevideo (pepper salami, US 2009-2010)
e.g. S. Enteritidis (fresh cheese and cheddar, Canada 2008)
e.g. S Kedougou (baby food, Spain 2008)
e.g. S. Saintpaul (Jalapeno & serrano peppers, US 2008)
e.g. S. agona (puffed rice & wheat, US 2008)
 ITP Food Safety Prof. Mieke Uyttendaele - 7 sept. 2009 Ghent University
Campylobacter jejuni/coli
                   • Family Campylobacteriaceae
                  • Gram negative, small, spiral-
                    shaped

     Salmonella         • Intestinal tract of broilers
                     (and also wild birds / rodents !)

      • Mostly associated with poultry meat
             but also water borne !

• Enteritis (abdominal cramps, diarrhea, fever and
     Guillan-Barré syndrome, reactive arthritis,
               irritable bowel syndrome)
             • Infective dose: 500-106

• Large genetic diversity (MLST typing), frequent
  recombination (response to selective pressure)
Biosecurity on the farm
an anteroom with hygiene barrier
(with adequate boot dips and hand wash facilities)
 a rodent-free and concrete hard surround with no standing water
Potable water supply or treated well water
the exclusion of pets and control of visitors
    additional measures as examples
  ‣ The use of house-specific footwear and clothing,
  ‣ Provision of dedicated changing facilities
                                                            www.camcon-eu.net

  ‣ External training for farm managers
  ‣ Under investigation : the introduction of fly screens for houses
          Symposium Voedselveiligheid – Salmonella Campylobacter STEC 12/03/2015, Bunnik, Nl
          Mieke Uyttendaele www.foodmicrobiology.UGent.be
Campylobacter uit kippen main
 reservoir

Baseline studies !

Interreg III “Beheers de voedselketen” slotconferentie   Turnhout,
                                                           Sampers 13etdecember  2007
                                                                        al. - Habib et al
Belang van voedselveiligheid in de keten                 Seliwiorstow
                                                                 Prof.et
                                                                       M.al. - Duarte et al.
                                                                           Uyttendaele
Campylobacter carcass contamination throughout the
slaughter process of Campylobacter-positive broiler batches

 Main findings
 •   High within batch and between batches variability in Campylobacter carcass contamination
 •   Number of carcasses after chilling contaminated ≥1000 cfu/g differed between plants
 • Control of external contamination of broilers entering the slaughter process may result in
   lower carcass contamination
 • Plucking, evisceration, washing and chilling influence Campylobacter counts on carcasses
                                                                   Slaughterhouse      Percentage of highly
                                                                                     contaminated carcasses
                                                                                    (≥3 log cfu/g) after chilling

                                                                         A                       47

                                                                         B                       40

                                                                         C                       78

                                                                         D                       23

                                                                         E                       20

                                                                         F                       40

              16
            Symposium  Voedselveiligheid – Salmonella Campylobacter STEC 12/03/2015, Bunnik, Nl
            Mieke Uyttendaele www.foodmicrobiology.UGent.be
It is all about the numbers !
                                     Frequency

                                       400
                                                                  48.02% (315/656)
                                                            of the Belgian chicken meat

                                       350
                                                         preparations (CMP) samples tested
                                                             positive for C. jejuni/ coli

                                       300
                                                        Action limit of 100 cfu/g CMP in Be

                                       250
                                                          29.4%

                                       200
                                                        ≥ 10 to <              11.63%
                                                                                ≥ 100
                                       150
                                                        100 CFU/g
                                       100
                                       50                                       CFU/g

     Action limit of
                                       0

    1000 cfu/g neck                          0.5    1      1.5    2     2.5    3     3.5   4   4.5
   skin in UK / Be / Nl                                 Campylobacter count (log10 CFU/g)

Symposium Voedselveiligheid – Salmonella Campylobacter STEC 12/03/2015, Bunnik, Nl
Mieke Uyttendaele www.foodmicrobiology.UGent.be
It is not all about poultry !

   EFSA opinion on raw milk in 2015

Symposium Voedselveiligheid – Salmonella Campylobacter STEC 12/03/2015, Bunnik, Nl
Mieke Uyttendaele www.foodmicrobiology.UGent.be
Shiga-toxin producing E. coli (STEC)
                        • Family Enterobacteriaceae

                       • Gram negative, rod-shaped
    E. coli

 • Intestinal tract of humans & animals  advantageous
           (e.g. digestion, production of vitamins)
• But some acquired DNA  pathogenic (e.g. Shiga toxin-
             producing Escherichia coli (STEC))

         • Mostly associated with bovine meat
       • But also raw milk & derived dairy products
          • Also sprouted seeds / leafy greens

         • Gastroenteritis, hemorrhagic colitis and
         hemolytic uremic syndrome (HUS)possible
               Infective dose: 10-100 cells !
EHEC outbreak in Germany/France in May/July
2011 - STEC in fresh produce ?
                                                                                       Not cucumbers
                                                                                        from Spain but
                                                                                       Fenugreek seed
                                                                                          from Egypt

EFSA Scientific Opinion in 2011 on risk posed by Shiga toxin-producing Escherichia
    coli (STEC) and other pathogenic bacteria in seeds and sprouted seeds
EFSA Scientific Opinion in 2013 on VTEC Seropathotype and scientific criteria regarding
    pathogenicity assessment.
EFSA Scientific Opinion in 2013-2014 on the risk posed by pathogens in food of non-
    animal origin. Part 1-5
ISO/TS 13136:2012(E). Horizontal method for the detection STEC and the determination
    of O157, O111, O26, O103 and O145 serogroups.
EC Traceability & certification requirements, approval of establishments of sprouts/seeds
Food Safety criteria in EC 2073/2005 for sprouts:
 n= 5 c= 0 absence/25g Salmonella & (STEC) O157, O26, O111, O103, O145 and O104
EC Training for Safer Food : “good practices in the fresh produce supply chain”

        Symposium Voedselveiligheid – Salmonella Campylobacter STEC 12/03/2015, Bunnik, Nl
        Mieke Uyttendaele www.foodmicrobiology.UGent.be
STEC but also Salmonella & even Campylobacter in
 fresh produce: contamination via water, soil, wild life ?
                  Spinach-associated                      Jalapenos peppers
                  Escherichia coli O157:H7                 Salmonella Saintpaul ,
                  Outbreak in US (2006). The              US (2008) The outbreak
                  river functioned as a vector            strain was isolated from
                  between the contaminated                two environmental samples, agricultural
                  feces and the irrigation wells          water, and Serrano peppers on a farm in
                                                          Mexico growing peppers

                            Alaska, US (2008) raw peas fecal contaminated
                           with Campylobacter by wild birds (Sandhill cranes)
                                     (established by MLST typing)

 Sweden (2005) iceberg lettuce and E. coli            Australia (2006): papayas and
O157: irrigated by water from a small stream          Salmonella Litchfield : washed
   & cattle at a farm upstream from the               with water from a source later
                irrigation point                      determined to contain other
                                                      serotypes of Salmonella

         Symposium Voedselveiligheid – Salmonella Campylobacter STEC 12/03/2015, Bunnik, Nl
         Mieke Uyttendaele www.foodmicrobiology.UGent.be
Two STEC outbreaks
                                                        in Belgium

  STEC uit runderen als main reservoir
  Ook uitbraken In dairy
  In foods of non animal origin

  Schema van STEC ?

Symposium Voedselveiligheid – Salmonella Campylobacter STEC 12/03/2015, Bunnik, Nl
Mieke Uyttendaele www.foodmicrobiology.UGent.be
non RTE food
                 appropriate
                 treatment to
                reduce STEC

 RTE food /
non RTE food
  treatment
 insufficient
The preventive approach(QA) and control of
  Salmonella , STEC, Campylobacter
  Product specific preventive measures
  - GAP: Good Agricultural Practices at primary production
  - Good Slaughtering practices
  - Processing industry : implementation of Pre-Requisite
     Programs (GMP) and HACCP
  verification by indicator testing ?
  E. coli: indicator of fecal contamination
       Elevated numbers of E. coli relate to higher likelihood of
       finding enteric pathogens BUT predictive value is moderate
             good practices ≠ pathogen finding !
  Or rather have actual pathogen testing in place ?
   Sampling plans (always) have limitations for ensuring safety

Symposium Voedselveiligheid – Salmonella Campylobacter STEC 12/03/2015, Bunnik, Nl
Mieke Uyttendaele www.foodmicrobiology.UGent.be
Salmonella
                                                      vs
                                                 Campylobacter
                                                      vs
                                                    STEC
  -     History
  -     Taxonomy, reservoirs, associated foods
  -     Legislation, action limits
  - Detection methods
  -     Growth and survival

Symposium Voedselveiligheid – Salmonella Campylobacter STEC 12/03/2015, Bunnik, Nl
Mieke Uyttendaele www.foodmicrobiology.UGent.be
Detection methods
                                Molecular detection
 Classical culture methods     STEC: ISO 13136:2012

Salmonella : ISO 6579:2002
                                           DNA

                                                            PCR

Campylobacter :
  ISO 10272:
     2006
                             look for suspected colonies,
                               for further confirmation
Salmonella
                                                      vs
                                                 Campylobacter
                                                      vs
                                                    STEC
  -     History
  -     Taxonomy, reservoirs, associated foods
  -     Legislation, action limits
  -     Detection methods
  - Growth and survival

Symposium Voedselveiligheid – Salmonella Campylobacter STEC 12/03/2015, Bunnik, Nl
Mieke Uyttendaele www.foodmicrobiology.UGent.be
Growth* & survival of
Salmonella, STEC, Campylobacter
               Tmin      pHmin Awm Dx°C(min)
Salmonella 7-8°C 4.4            0.95 D60 0.5
Camp.       32°C     4.9        0.99 D55 1.50
Jejuni*   *microaerophilic (5% O2-10%CO2-85%N2)
E. coli     7-8°C 4.4           0.95 D60 0.46

Yers. enter.   -1,3°C    4.5   0.96   D58 1.6
L. monoc.      0°C       4.4   0.92   D60 2.50

*Modified from ICMSF 5
Growth & survival of Salmonella, STEC,
Campylobacter
  cold chain
    Salmonella - E. coli / STEC -Campylobacter
              growth inhibition SURVIVAL ! (humid conditions for Campy !)
              growth upon temperature abuse (10°C or for Campy > 30°C)
  frozen storage
    in particular susceptible to damage
             sublethal injury provoking gradual inactivation
             Campylobacter susceptible to freezing : control strategy !
  packaging
   meat and fish             in air : psychrotrophic Entero’s /Pseudomonas
                       in MAP (20-40% CO2) : Entero’s suppressed by LAB
    fresh produce                impact physiology plant tissue, not microbiology
   fresh-cut leafy greens because of exudates may promote growth / but not if intact cut
   baby leaves/herb leaves or fruit vegetables: keep natural strength and protection
   against colonisation/growth
Impact of freezing on Campylobacer
              contamination               Frozen (partial/total)                   Not f rozen (f resh)

                  300
                   200
Frequency

                   100
                          0

                              0       1         2       3          4   5   0   1         2      3         4   5
                                                     Campylobacter count (log10 CFU/g)
                         Graphs by Freez_f ig

              ►          Survey
                            generalized negative binomial regression: Counts of
              Campylobacter are significantly less (P= 0.006) in products made from
              frozen meat (totally or partially) compared to those made from fresh meat

            Symposium Voedselveiligheid – Salmonella Campylobacter STEC 12/03/2015, Bunnik, Nl
            Mieke Uyttendaele www.foodmicrobiology.UGent.be
A gradual decrease (die-off) for both             A restricted die-off and slight
                Salmonella and E. coli O157:H7 at              increase for both Salmonella and
                         all temperatures                     E. coli O157:H7 at all temperatures

                                   15°C: below DL or molded
                                                                  Typical for basil or similar
                                                                  survival on leafy greens?
E. coli O157

                                                                  Additional experiment on:
                                                              •     Fresh-cut iceberg lettuce
                                                                    •       Butterhead lettuce
                                                                            •    Baby leaves
                                                                        •       Spinach leaves
                                                                            •    Lamb lettuce
Salmonella

                                                                                                    31
22°C: increase to higher numbers for fresh-cut iceberg
                                       lettuce and butterhead lettuce
                              7°C: comparable
                                Presence        decrease
                                          of exudates   as on
                                                          nutrients for growth
                                     basil after 3 days
                               Restricted growth due to limited availability of
                                          nutrients on whole leaves

E. coli O157

        Symposium Voedselveiligheid – Salmonella Campylobacter STEC 12/03/2015, Bunnik, Nl
        Mieke Uyttendaele www.foodmicrobiology.UGent.be
Salmonella, STEC, Campylobacter in
  processed foods
       Time/temperature recommended by ACMSF
       (Advisory Committee on the Microbiological Safety of Food
       UK) for the cooking of ground beef

       60°C          45 min provides 6D reductions of E. coli 0157,
       65°C          10 min Salmonella spp. and L. monocytogenes !
       70°C          2 min   E. coli as sole target organism : 70°C /
       75°C          30 sec 1.3 min if 95% confidence of achieving
       80°C          6 sec      6D reduction deemed acceptable
                                      Campylobacter most susceptible to heat
                                                   treatment

Symposium Voedselveiligheid – Salmonella Campylobacter STEC 12/03/2015, Bunnik, Nl
Mieke Uyttendaele www.foodmicrobiology.UGent.be
Inactivation by “appropriate” heat treatment !

                 5                                                              90

                                                                                80
                 4
                                                                                70

                 3                                                              60
   log (KVE/g)

                                                                                50

                                                                                      T (°C)
                                                                                               log (KVE/g)
                 2
                                                                                               Tintern
                                                                                40

                 1                                                              30

                                                                                20
                 0
                      0   90 120 150 165 180 195 210 240 270 330 390 450 510 570 10

                 -1                                                             0
                                             baktijd (s)

    In institutional food services,
  catering, home preparation : take
   care for undercooking or cross-
  contamination – food handlers !!!
Symposium Voedselveiligheid – Salmonella Campylobacter STEC 12/03/2015, Bunnik, Nl
Mieke Uyttendaele www.foodmicrobiology.UGent.be
Salmonella, STEC, Campylobacter in
processed foods - SHELF LIFE > 10 days
Microbial stability based upon (combination) of adverse
   conditions (pH, aw, Temp., preservatives, atmosphere, etc.)

Acidity (pH min 4.4 – 4.5) e.g. STEC (O157) strains
depend on nature of the acid
e.g. apple juice ! fermented/acidified foods !

Wateractivity (aw min 0.94-0.95) e.g. Salmonella strains
survival in low moisture foods
e.g. – confectionary / peanut butter / chocolate

Campylobacter: susceptible to adverse conditions – not an issue !

Note : in composite foods
Take into account addition of
(contaminated) seasonings/ingredients :
(semi) dried herbs, spices, nuts, berries, cereals…,
Thank you for your attention !

                                       ?
Symposium Voedselveiligheid – Salmonella Campylobacter STEC 12/03/2015, Bunnik, Nl
Mieke Uyttendaele www.foodmicrobiology.UGent.be
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