Engineering materials from an understanding of nature - Ingenta Connect
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Impact Objectives • Investigate the material properties and behaviours of various biological and engineering materials in different environments at multiscales • Investigate how nature designs materials with atomic precision using computational modelling • Apply learnings to develop innovative materials with advanced functions Engineering materials from an understanding of nature Assistant Professor Chia-Ching Chou is using computational modelling to extend understanding of the origin of the material properties and benefit the design of nature-inspired materials Can you explain My research focuses on computational the change of materials’ composition or how you are using investigations of the mechanics of biological structure at the microscale can be linked computational and engineering materials. We investigate to the change of the materials’ behaviour modelling to the material properties and behaviours of at the macroscale. From our recent uncover knowledge various biological and engineering materials study into the effect of mutation in the about the way in different environments at multiscales. epithelial protein, our simulation shows nature designs Through a series of simulations and that the local mutations in sequence don’t materials? numerical analysis, my research will provide necessarily alter the secondary structure fundamental explanations of the origins formations, but the interaction of amino Nature uses surprisingly simple building of mutability of materials and enable the acids might affect the higher order assembly blocks to design and make materials with design of novel materials for biomedical and of intermediate filament and lead to the intriguing properties, such as light weight, engineering applications. The outcome of change of material’s properties. The results high strength and remarkable toughness. the studies will extend our understanding could be correlated with diseases associated Of the basic chemical elements, there are of the origin of the materials’ properties with genetic mutations and other structural only 20 different amino acids in proteins and benefit the current studies on nature- defects in epithelial keratin to understand which is fascinating to me. I am working inspired materials to improve their design. the effect of each mutation and develop on understanding the design of natural possible treatments. materials and how this relates to a given Can you share a little about what you material’s composition and properties. Now, have discovered so far from your studies? Are there any findings from these studies with new electronics devices development, In particular, about local mutations and that you are particularly pleased with? affordable computational resources, and the structural formations? breakthrough of computational algorithms, We are very happy to see the approach the field of computational modelling provides I have studied keratin proteins since I was we developed can successfully construct great opportunities to investigate how nature a PhD student at Massachusetts Institute a proper atomistic structure as an initial designs materials and apply those learnings of Technology (MIT). My PhD supervisor, model for the study. In addition, from the to the development of innovative materials Markus Buehler, first introduced me to simulation of the epithelial protein, we can with advanced functions. this material and I continued the study at reveal the molecular detail of the effect of National Taiwan University. We developed local mutations on the protein structure and You are based at the Institute of Applied a multiscale approach to exploit the higher order assembly. Mechanics, National Taiwan University. What mechanism of materials’ composition, type of research are you involved in at the structure, behaviour and mechanics at Institute? different scales. We have learned that www.impact.pub 27
Uncovering the properties of hair and skin keratin A team based within the Institute of Applied Mechanics at National Taiwan University is investigating the molecular mechanisms and mechanical properties of different types of keratin. The findings will help to decipher how the structures of particular materials relate to their distinct functions and help integrate nanoscale approaches to engineering problems Recent developments in electronics, One of the team’s investigations involves want to provide details that explain how computers and computational modelling looking at the molecular mechanisms and the molecular composition affects the are enabling researchers to analyse mechanical properties of epithelial keratin mechanical properties from a fundamental the properties of materials that could and trichocyte keratin using multiscale point of view, as well as discussing the dramatically improve engineering processes modelling. ‘Keratin is a type of intermediate mechanism in different hierarchies of and even the ways we treat certain diseases. filament protein and can be found in our keratin. Assistant Professor Chia-Ching Chou leads a hair and skin. For the hair keratin (trichocyte team that is taking inspiration from nature. keratin), it is very tough (which is why the COMPUTATIONAL MODELLING prince can use it to climb up the tower in To aid their research, the team is using EPITHELIAL KERATIN Tangled!), but has low extensibility,’ explains atomistic and multiscale computational AND TRICHOCYTE KERATIN Chou. ‘From an engineering perspective, modelling. ‘My team focuses on developing Based within the Institute of Applied hair keratin is an extremely durable material a bottom-up approach to investigate the Mechanics at National Taiwan University in that has been widely used in commercial relationships of structure, behaviours and Taiwan, Chou forms part of a project funded products for over 2,000 years, such as wool properties of the biological materials in by the Ministry of Science and Technology in the textile industry.’ different environments at multiscales,’ in Taiwan that is working to understand the highlights Chou. ‘Molecular dynamics molecular mechanisms and mechanical The other type of keratin the team is simulation is a powerful tool for us to properties of materials. studying is skin keratin (epithelial keratin) investigate the composition, structure and which cannot sustain the same load as behaviour of materials at the molecular level The hope is that by uncovering the precise hair keratin, but has larger extensibility. and it can be further applied to predict the structures and mechanisms - and how they Interestingly, while both hair and skin properties of materials if a proper model is affect the properties of a given material - keratin share a high order of similarity, used.’ the team can apply those findings to the in terms of their molecular structure development of new materials that will help and hierarchical assembly, the molecular The team starts from the study of solve a number of problems. structure of hair keratin has stronger microscale models of materials using interactions, which enables it to better molecular dynamics simulation (MD) and resist external influence. The team therefore extracts the information from MD to build 28 www.impact.pub
a larger model to investigate the behaviour There are other challenges too. ‘It is understanding how mutations in chemical at the macroscale. ‘By studying hair and not easy to find keratin mesoscopic compositions can affect the structure and skin keratin, we want to provide an answer experimental data for us to compare mechanical properties of a material. The regarding how sequence and chemical the established meso-scale biomaterial protocols they use could one day be applied By studying hair and skin keratin, we want to provide an answer regarding how sequence and chemical bonding affect the microscopic, mesoscopic and macroscopic level properties of materials and contribute to the materials’ distinct properties bonding affect the microscopic, mesoscopic model, so the experimental data of similar to the study of other fibre-like materials and and macroscopic level properties of materials, vimentin intermediate filament, their mechanism, which could potentially materials and contribute to the materials’ was compared first,’ says Chou. ‘When be exploited in the design of bio-inspired distinct properties,’ confirms Chou. Through we use conventional MD simulations, we polymers, fibre materials, novel composites the use of MD, they will provide insights sometimes face time scale and chemical and targeted drug delivery systems. l into the mechanisms of chemical bonds in reaction limitations and may not be able to materials and illustrate the importance of solve representative molecular structures.’ the environment which the material finds To overcome the challenge, they have itself within. chosen to use advanced MD simulations, such as Replica exchange molecular Project Insights Importantly, by elucidating the link between dynamics. This has helped the team to break FUNDING the chemical composition, protein structure through the time scale limitations and solve Ministry of Science and Technology and properties of different keratins, the representative molecular structures. (Taiwan): Grant number team will be able to build knowledge of 1082218E002072MY2 other fibre-like materials. ‘In addition, we FUTURE PROGRESS TEAM MEMBERS hope to learn how mutations in chemical Chou is now developing their model to Chien-Yu Pan, Chen-Yu Yang, Tsung-Wan composition affect the structure and study the properties of keratin fibrils at a Hsiao, Yu-Chang Lai, Tzu-Lun Huang properties of keratins, and apply those larger scale. ‘Recent studies have shown results to diseases that are caused by that the keratin intermediate filament CONTACT mutations,’ Chou outlines. network plays an important role in a cell’s Assistant Professor Chia-Ching Chou response to tensile and shear stresses,’ clarifies Chou. ‘From the larger model, T: +886 2 33665639 CHALLENGES WITH COMPLEXITY E: ccchou@iam.ntu.edu.tw Understandably, given the complexity of we can further study the mechanisms of W: https://sites.google.com/g.ntu.edu.tw/ the project, the team has faced a number the keratin network in a cell’s response to ccchou of challenges which they have worked hard tensile and shear stresses and the effects to overcome. ‘For certain keratin protein of various single-point mutations, which BIO molecules whose molecular structure would help us understand the effect of each Dr Chia-Ching Chou received her PhD has not been solved by experiments or mutation and develop treatments.’ They degree from MIT. She is an Assistant are also planning to apply this approach to Professor in the Institute of Applied simulation, the team uses homology Mechanics, National Taiwan University. modelling methods or previous in-house build other keratin proteins and investigate Her research interests are associated approaches developed by the group to build how the environmental influence affects the with the employment of atomistic and an initial model,’ points out Chou. However, structure and mechanical property using full multiscale computational modelling there are limitations to the crystal protein atomistic models. to understand the mechanics of structure they use as a template, so they materials, including biomaterials and combine the results to build a full-length Ultimately, Chou and the team are filling synthetic materials at the nanoscale and in knowledge gaps that are vital to our microscale, with an aim to integrate model. nanoscale approaches to engineering problems. Atomistic model of keratin k5/k14-2B heterodimer www.impact.pub 29
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