BAGECO 15 - PROGRAMME 26-30 May 2019 Lisbon, Portugal - 15th Symposium on Bacterial Genetics ...

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BAGECO 15 - PROGRAMME 26-30 May 2019 Lisbon, Portugal - 15th Symposium on Bacterial Genetics ...
15th Symposium on
                            BAGECO 15
                                Bacterial Genetics and Ecology

                    © Massimiliano Cardinale, Renato Fani, Anna Maria Puglia

                    Ecosystem drivers in
                     a changing planet
                                           26–30 May 2019
                                           Lisbon, Portugal

                                        PROGRAMME

                    © joyfull l Shutterstock.com
BAGECO 15 - PROGRAMME 26-30 May 2019 Lisbon, Portugal - 15th Symposium on Bacterial Genetics ...
PROGRAMME OVERVIEW

     Sun, 26 May                Mon, 27 May                   Tue, 28 May                Wed, 29 May                    Thu, 30 May
                           09:00–10:30                  09:00–10:30                 09:00–10:30
                           Session 1                    Session 4                 Session 7
                           Horizontal gene              Host-microbe              Microbiology in the
                                                                                                                  09:30–11:00
                           transfer, mobile genetic     interactions as driving   metagenomics era:
                           elements and antibiotic      forces of ecosystems/     tools, applications and         Session 9
                           resistance                   round table               the emergence of a              Living in an increa-
                                                S. 13                       S. 16 novel tree of life S. 18        singly aseptic world?
                                                                                                                  Microbiology in the built
                                                                                                                  and social environment
                           10:45–12:45                  10:45–12:45                 10:45–12:45
                           Session 2                    Session 5                 Session 8                                  S. 20
                           Microbial adaptation,        Host-microbe              The wonders of
                           functioning and              interactions – Ecology    secondary metabolism:
                           biodiversity in a            and evolution             from natural products 11:30–13:00
                           changing planet                                        to novel biocatalysts    Session 10
                                                                                                           Building a modern
                                                S. 13                       S. 16                    S. 18 microbial ecological
                                                                                                           theory – conceptual &
                                                                                                           technical advances
                                                                                                                             S. 20
                                                                                    13:00–15:00                   13:00–13:15
                                                                                    COST Session                  Farewell            S. 21
                                                                                    Sattellite meeting:
                           13:30–15:30                  13:30–15:30
                                                                                    COST Action
                           Session 3                  Session 6                     HUPLANTcontrol
                           Microbiomes for            Microbiomes for
                           sustainability:            sustainability – Environ-
                           boosting agri- and         mental pollution and                                S. 19
                           aquaculture                bioremediation: current
                           ecosystems                 and future challenges
                                                S. 14                     S. 17
                           15:30–18:30                  15:30–18:30
                           Poster Session I       Poster Session II
                           With snacks and drinks With snacks and drinks
17:00–17:30
Opening            S. 12
17:30–18:30
Opening Lecture

                   S. 12                        S. 22                       S. 32
18:30–20:00
Welcome Recepetion

                   S. 10                                                            19:00–01:00
                                                                                    Social Evening

                                                                                                          S. 11

2
BAGECO 15 - PROGRAMME 26-30 May 2019 Lisbon, Portugal - 15th Symposium on Bacterial Genetics ...
TABLE OF CONTENTS

Programme Overview .............................................................................................................. 2

Organisation and Imprint ......................................................................................................... 4

Welcome Note ........................................................................................................................ 5

General Information ................................................................................................................. 6

Tips for Authors and Presenters ............................................................................................... 8

Sponsors, Exhibitors and Media Cooperations ......................................................................... 9

Social Programme
   Sunday, 26 May ................................................................................................................ 10
   Wednesday, 29 May ......................................................................................................... 10

Scientific Programme
    Sunday, 26 May ................................................................................................................   12
    Monday, 27 May ...............................................................................................................    13
    Tuesday, 28 May ..............................................................................................................    16
    Wednesday, 29 May .........................................................................................................       18
    Thursday, 30 May .............................................................................................................    20

Poster Sessions
    Monday, 27 May ............................................................................................................... 22
    Tuesday, 28 May .............................................................................................................. 32

Index of Invited Speakers and Presenting Authors .................................................................... 44

                                                                                                                                      3
BAGECO 15 - PROGRAMME 26-30 May 2019 Lisbon, Portugal - 15th Symposium on Bacterial Genetics ...
ORGANISATION AND IMPRINT

Venue                                                Date
Calouste Gulbenkian Foundation                       26–30 May 2019
Av. de Berna 45 A
1067-001 Lisbon, Portugal

Conference Website
www.bageco.org

Conference Chair                                     Conference Co-Chair
PhD Rodrigo Costa                                    PhD Newton C. M. Gomes
Institute for Bioengineering and Biosciences         Department of Biology & CESAM
Instituto Superior Técnico                           University of Aveiro
Lisbon (Portugal)                                    Aveiro (Portugal)

International Scientific Committee
Mark Bailey (United Kingdom)                         Pascal Simonet (France)
Marco Bazzicalupo (Italy)                            Kornelia Smalla (Germany)
Gabriele Berg (Austria)                              Christoph C. Tebbe (Germany)
Janet Jansson (United States)                        James Tiedje (United States)
Amalia Karagouni (Greece)                            Jan Dirk van Elsas (The Netherlands)
Ines Mandic-Mulec (Slovenia)                         Timothy M. Vogel (France)
James Prosser (United Kingdom)                       Elizabeth Wellington (United Kingdom)

Local Organising Committee
Francisco Coelho                                     Tina Keller-Costa
Isabel Sá-Correia                                    Célia M. Manaia
Rodrigo Costa                                        Paula V. Morais
Newton C. M. Gomes                                   Diogo Neves Proença

Conference Organisation
Conventus Congressmanagement & Marketing GmbH
Paula Hartmann/Jenny Gotzmann
Carl-Pulfrich-Strasse 1 I 07745 Jena, Germany
Phone +49 3641 31 16-326/-376 I bageco@conventus.de I www.conventus.de

Design/Layout
Layout                 www.krea.tif–design.de
Print                  siblog – Gesellschaft für Dialogmarketing, Fulfillment & Lettershop mbH
Circulation            300
Editorial Deadline     6 May 2019

4
BAGECO 15 - PROGRAMME 26-30 May 2019 Lisbon, Portugal - 15th Symposium on Bacterial Genetics ...
WELCOME NOTE

Dear colleagues, 

During the last few decades, the bi-annual BAGECO symposium has established itself as a leading
European conference in prokaryotic genetics and ecology. The BAGECO 15 symposium will once
again unite leading scientists to debate the most pressing questions in the broad fields of microbio-
logy, microbial ecology, metagenomics and complementary disciplines.

In particular, BAGECO 15 aims to highlight the pivotal roles that microorganisms play in the func-
tioning of natural and man-made environments. Beyond the acknowledged and acute pressures
that natural biomes face due to modern climate change, the way in which we perceive ourselves
and the natural world is as well changing rapidly. Our greater understanding of the assembly and
functioning of microbiomes in nature, and improved ability to harness the diverse metabolism of
cultured and uncultured microorganisms, are expected to have a profound impact on how we manage
and mitigate problems of environmental, societal and public health concern within a future circular
economy framework.

Microorganisms are in the limelight of this changing planet, and it is the duty of our community to
envision how fundamental knowledge on microbial physiology, genetics and ecology can contribute
to the sustainable use of ecosystems, the development of cost-effective environment conservation
and remediation strategies, improvements in food production and the promotion of human and animal
health, and to steer the discovery of new drugs and biosensors. In this context, BAGECO 15 offers
an exciting multidisciplinary programme at the forefront of scientific knowledge, inviting high-quality
research on contemporary issues of relevance to modern microbial genetics and ecology.

The programme is well suited to the participation of early- and mid-carrier scientists who wish to
showcase and disseminate their research in a highly interactive symposium. Importantly, BAGECO
symposia are traditionally organized as a single session, promoting better exchange between all
delegates and wider dissemination of the presented research to a truly diverse audience. Ample
opportunities for discussion and networking are offered during the poster sessions, which provide
appropriate time and space for delegates to interact with one another and explore all the work being
presented at the symposium in its full extent.

We hope that the symposium will provide plenty of opportunities for you to interact and share your
work with renowned scientists in the field while experiencing the unique culture and landscape of-
fered by Lisbon and surrounding areas.
We welcome you to Lisbon!

Rodrigo Costa                                       Newton C. M. Gomes
Conference Chair of BAGECO 15                       Conference Co-Chair of BAGECO 15

                                                                                                     5
BAGECO 15 - PROGRAMME 26-30 May 2019 Lisbon, Portugal - 15th Symposium on Bacterial Genetics ...
GENERAL INFORMATION

Opening Hours
                        Sunday      Monday                Tuesday    Wednesday   Thursday
Industrial Exhibition      –      10:00–18:30           10:30–18:30 10:00–13:00      –
Poster Exhibition          –      10:30–18:30           10:30–18:30      –           –
Check-In              15:00–19:00 08:30–18:00           08:30–18:00 08:30–13:00 09:00–11:30
Media Check           15:00–19:00 08:30–18:00           08:30–18:00 08:30–13:00 09:00–11:30

Name Badge
Admission to scientific sessions and to the industrial exhibition is restricted to participants wearing
their badge. Please wear your name badge during all conference events, including the welcome
reception and the social evening. Name badges for exhibitors will be given to the exhibit personnel.

Certificate of Attendance
Certificates of attendance will be send to all participants via email after the conference. Please
make sure to provide your email address.

Check-In and Media Check
The Check-In can be found on the left hand side, just a few steps downstairs, after you enter the
conference area. At the Check-In desk you can also test your presentation on a laptop (Media Check).

WIFI Access
WIFI is available for free throughout the whole conference.
User name:          BAGECO15
Access key:         Lisbon2019

Industrial Exhibition
There is an accompanying industrial exhibition. The exhibitors are looking forward to welcoming
you and to present their comprehensive range of innovative products.

6
WISSENSCHAFTLICHES PROGRAMM

                         You examine.

                           We publish.

Aquatic Microbial Ecology
• international peer-reviewed journal
• very high quality of scientific contributions
• rigorous review process
                                                            AME
• close attention to detail during production
                                                           Inter-Research
                                                           ame.int-res.com
                                                           ir@int-res.com
                                                             @ame_intres
                                                             /AquatMicrobEcol

                                                                                7
TIPS FOR AUTHORS AND PRESENTERS

Submitting Your Presentation/Technical Information
The presentation should be prepared as PDF, MS Office PowerPoint 2016 for Windows or key for
Macintosh DVD in format 16:9.

A presentation notebook with a PDF reader and MS Office PowerPoint 2016 will be provided. The
use of personal notebooks is possible upon agreement. However, it may interrupt the flow of the
programme in the lecture hall. Please provide an adapter for VGA if necessary. A notebook, presenter
and laser pointer are available at the speaker’s podium in the lecture hall. If necessary a technical
supervisor can help you. To guarantee a smooth running programme please use a USB-stick (not
write protected) with your presentation. Please upload your presentation directly at the speaker’s
podium notebook.

Time Allotment
Please prepare your presentation for the allotted amount of time. Chairs and moderators may interrupt
should you overrun your time limit. Speaking time is assigned as follows (speaking +discussion time):

Opening Lecture         50 + 10 minutes
Invited Lectures        25 + 5 minutes
Abstract Authors        10 + 2 minutes/12 + 3 minutes

Poster Sessions
Posters should be no larger than DIN A0 (118.9 cm x 84.1 cm). Those are only to be used with the
designated pins. Pinboards will be numbered. You will find your poster number and session in the
programme book on page 22–43.
All posters are displayed in Sala 1 & 2. Poster presenters are asked to be present during their poster
session.

Please note that the poster session will be split into two parts. Posters of poster session I should be
erected on 27 May by 10:30 and removed on 27 May directly after the session. Posters of poster
session II should be erected on 28 May by 10:30 and removed on 28 May directly after the session.
All posters that have not been removed by then will be considered as waste.

FEMS Poster Prizes
The best posters will be honoured with a poster prize sponsored by FEMS:

1st place: 150 EUR and free access to the journal
2nd place: 100 EUR and free access to the journal

Winners will be announced at the closing session on Thursday, 30 May.

8
SPONSORS, EXHIBITORS AND MEDIA COOPERATIONS

Scientific Sponsors and Supporting Societies/Institution
International Society for Microbial Ecology (ISME)

European Federation of Microbiological Societies (FEMS)

Exhibitors
GENEWIZ Germany GmbH

NZYTech

Sarstedt, S.A.

Sponsor Conference Bags and Pens
STAB VIDA

Media Cooperations
Springer US
Microbial Ecology

Inter Research Science Center
Aquatic Microbial Ecology
Marine Ecology

S. Karger AG
Journal of Molecular Microbiology and Biotechnolgy

Trillium GmbH
Trillium Diagnostik

                                                                  State at printing

                                                                                 9
SOCIAL PROGRAMME I SUNDAY, 26 MAY

     Welcome Reception
     All participants are welcome to join their friends and colleagues for the
     Welcome gathering in the frame of the 15th Symposium on Bacterial Genet-
     ics and Ecology. Snacks and drinks will be provided during the evening.

     Time        18:30–20:00
     Venue       Calouste Gulbenkian Foundation
                 Av. de Berna 45A I 1067-001 Lisbon
     Price       included for conference participants
                 20 EUR for accompanying persons

                                                                   © CandyBox Images - Fotolia.com

SOCIAL PROGRAMME I WEDNESDAY, 29 MAY

     EKO Tuk Tour “old town”
     Use this great opportunity to drive around Lisbon. Visit the best points of
     view and enjoy a few hours of the modern and historical city.

     Time        13:00 Departure at the conference location
                 15:30 Arrival at the city centre
     Price       40 EUR (incl. lunchbox)
                 Request upon availabity. The tour will
                 happen by a minimum booking of
                 15 participants only.
                                                                   © 297645485 l Mapics l shutterstock.com

     HIPPO trip
     Take the chance to explore Lisbon from land and river! Learn about the rich
     history and culture of Portugal’s capital, while enjoying the thrill of being in
     a “bus” on the Tagus River.

     Time        14:30 Departure at the conference location
                 16:15 Doca de Santo Amaro
     Price       35 EUR (incl. lunchbox)
                 Request upon availabity. The tour will
                 happen by a minimum booking of
                 20 participants only.
                                                                   © Anne-Lotte O´Dwyer I wikimedia.org

10
SOCIAL PROGRAMME I WEDNESDAY, 29 MAY

Suggestions for things to do and see in Lisbon
Further suggestions (tours and restaurants) can be found online at
www.bageco.org/programme/social-programme.

Explore Lisbon
You can explore Lisbon by yourself with the Lisboa card. The card includes
free passing in 29 museums, monuments and places of interest and discount
for certain services. There are cards with different durations of validity:

72 hrs     40 EUR for adults
48 hrs     32 EUR for adults
24 hrs     19 EUR for adults

For further information and card booking please visit
www.visitlisboa.com.
                                                          © Xemenendura I Wikimedia.org

Social Evening
We cordially invite you to spend a wonderful evening in an elegant and
urban-chic atmosphere at the Monte Claros Restaurant. Enjoy wining and
dining with the best view the city has to offer. You will have the chance to
enjoy some great traditional music and to round off the day dancing and
chatting with friends and colleagues.

Time       19:00–01:00
Price      60 EUR
Venue      Monte Claros Restaurant
           Estrada de Montes Claros
           1400-047 Lisbon

                                                          © Mote Claros Restaurant

                                                                                          11
SCIENTIFIC PROGRAMME I SUNDAY, 26 MAY

17:00–17:30   Opening of BAGECO 15
Chair         Rodrigo Costa (Lisbon/Portugal)

              Welcome address of the conference chairs
              Rodrigo Costa (Lisbon/Portugal), Newton C. M. Gomes (Aveiro/Portugal)

17:30–18:30   Opening Lecture
Chairs        Rodrigo Costa (Lisbon/Portugal), Newton C. M. Gomes (Aveiro/Portugal)

17:30         The future of microbiome research – from products to data
              Nikos Kyrpides (San Francisco, California/United States)

18:30–19:30   Welcome Reception at the Venue
              See page 10

12
SCIENTIFIC PROGRAMME I MONDAY, 27 MAY

09:00–10:30   Session 1 – Horizontal gene transfer, mobile genetic elements and antibiotic
              resistance
Chairs        Isabel Sá-Correia (Lisbon/Portugal), Célia M. Manaia (Porto/Portugal)

09:00         The transferable resistome of produce – The missing link?
IL 1          Kornelia Smalla (Braunschweig/Germany)

09:30         Mobile DNA in arctic and antarctic microbiocenoses – diversity, horizontal
O1            transfer and role of plasmids in adaptation of psychrotolerant bacteria to
              extreme environments
              Lukasz Dziewit (Warsaw/Poland)

09:42         IncN plasmids are vectors disseminating colistin resistance in wastewater
O2            microbiota
              Zhuofeng Yu (Copenhagen/Denmark)

09:54         Genetic globetrotter – a marine plasmid hitch-hiking vast phylogenetic and
O3            geographic distances
              Jörn Petersen (Braunschweig/Germany)

10:06         Phylogenomics illuminates the evolution of acquired and intrinsic resistance in
O4            environmental multidrug-resistant (MDR) Stenotrophomonas
              Pablo Vinuesa (Cuernavaca/Mexico)

10:18         Bacillus subtilis – bacterial sex is more popular between less related organisms
O5            Polonca Stefanic (Ljubljana/Slovenia)

10:30–10:45   Industrial exhibition and coffee break

10:45–12:45   Session 2 – Microbial adaptation, functioning and biodiversity in a changing
              planet
Chairs        Tina Keller-Costa (Lisbon/Portugal), Kornelia Smalla (Braunschweig/Germany)

10:45         Contaminant antibiotic resistance in water environments
IL 2          Célia M. Manaia (Porto/Portugal)

11:15         Microbes in the city – a metagenomic trait-based analysis of microbial
O6            metacommunity structure along urbanization gradients
              Shinjini Mukherjee (Leuven/Belgium)

                                                                                             13
SCIENTIFIC PROGRAMME I MONDAY, 27 MAY

11:27         Impact of environmental perturbations on multiple ecological processes of
O7            adaptation in ammonia oxidisers
              Cecile Gubry-Rangin (Aberdeen/United Kingdom)

11:39         Understanding the reversion of soil CH4 flux across the forest-to-pasture
O8            conversion in the Amazon rainforest
              Siu Mui Tsai (Piracicaba/Brazil)

11:51         Exploring the potential and ecological implications of atmospheric gas
O9            scavenging in soil acidobacteria
              Stephanie A. Eichorst (Vienna/Austria)

12:03         Biogeographical and depth patterns of global marine prokaryotic community
O 10          structure and function
              Carmen Astudillo-Garcia (Auckland/New Zealand)

12:15         Life in the dark – patterns and functions of groundwater microbiomes
IL 3          Kirsten Küsel (Jena/Germany)

12:45–13:30   Industrial exhibition and lunch break

13:30–15:30   Session 3 – Microbiomes for sustainability – boosting agri- and aquaculture
              ecosystems
Chairs        Gabriele Berg (Graz/Austria), Newton C. M. Gomes (Aveiro/Portugal)

13:30         Probiotic bacteria as disease control agents in marine fish larval rearing
IL 4          Lone Gram (Lyngby/Denmark)

14:00         Facilitation and strain variability maintain persistence of generalist microbial
O 11          communities in the European seabass gut
              Itzik Mizrahi (Be’er Sheva/Israel)

14:15         Biological Denitrification Inhibition (BDI) in the field – strategy to improve plant
O 12          nutrition and growth
              William Galland (Villeurbanne/France)

14:30         Reduced potential for the degradation of phenolic compounds in the
O 13          rhizosphere of apples grown in replant soils
              Viviane Radl (Oberschleißheim/Germany)

14:45         Plant protection from a distance
O 14          Adam Ossowicki (Wageningen/The Netherlands)

14
SCIENTIFIC PROGRAMME I MONDAY, 27 MAY

15:00         Bioinformatics tools and strategy to select microbial strains for fermented food
O 15          products
              Hélène Falentin (Rennes/France)

15:15         High-throughput screening for beneficial synthetic microbial communities
O 16          Jonathan Friedman (Rehovot/Israel)

15:30–18:30   Poster Session I
Room          Sala 1 and 2
              See page 22

                                                                                           15
SCIENTIFIC PROGRAMME I TUESDAY, 28 MAY

09:00–10:30   Session 4 – Host-microbe interactions as driving forces of ecosystems
              round table
Chairs        Tina Keller-Costa (Lisbon/Portugal), Michael Sweet (Derby/United Kingdom)

09:00         Microbiome manipulation of marine hosts and its potential to foster ecosystem
IL 5          resilience
              Raquel S. Peixoto (Rio de Janeiro/Brazil)

09:30         Round Table – “Microbiome Manipulation using Beneficial Microbes” promoted
              by BAGECO and the Beneficial Microbes for Macroorganisms (BMMO) network
              Panelists
              Raquel S. Peixoto (Rio de Janeiro/Brazil), Lone Gram (Lyngby/Denmark)
              Ute Hentschel (Würzburg/Germany), Gabriele Berg (Graz, Austria)

10:30–10:45   Industrial exhibition and coffee break

10:45–12:45   Session 5 – Host-microbe interactions: Ecology and evolution
Chairs        Raquel S. Peixoto (Rio de Janeiro/Brazil), Rodrigo Costa (Lisbon/Portugal)

10:45         Sponge holobionts – from microbes to ecosystems
IL 6          Ute Hentschel (Würzburg/Germany)

11:15         Vibrio cholerae in food vacuoles expelled by protozoa are more infectious
O 17          in vivo
              Diane McDougald (Sydney/Australia)

11:30         Heritability and domestication of the cereal seed microbiota
O 18          Massimiliano Cardinale (Lecce/Italy)

11:45         Insights into the diazotrophic microbiome of wetland rice and its N2-fixation
O 19          activity
              Dagmar Woebken (Vienna/Austria)

12:00         Biologically regulated biomineralization promotes persistent infections and
O 20          biofilm formation
              Ilana Kolodkin-Gal (Rehovot/Israel)

12:15         Modulation of fish microbe-interactions in recirculating aquaculture systems
IL 7          (RAS)
              Newton C. M. Gomes (Aveiro/Portugal)

12:45–13:30   Industrial exhibition and lunch break

16
SCIENTIFIC PROGRAMME I TUESDAY, 28 MAY

13:30–15:30   Session 6 – Microbiomes for sustainability – Environmental pollution and
              bioremediation – current and future challenges
Chairs        Francisco Coelho, Newton C. M. Gomes (Aveiro/Portugal)

13:30         Central role of microbial biofilms in the biodegradation of hydrocarbons
IL 8          Frederic Coulon (Cranfield/United Kingdom)

14:00         DNA- and transcriptome-stable isotope probing together with the genome
O 21          analysis of Zoogloea oleivorans reveal taxonomic and functional insights into
              microaerobic toluene degradation
              András Táncsics (Gödöllő/Hungary)

14:15         Effects of plant and soil inoculum on abundance of bacterial and archaeal
O 22          N-cycling guilds after remediation of heavy metal contaminated soil
              Marjetka Suhadolc (Ljubljana/Slovenia)

14:30         Development and optimization of an efficient treatment strategy for
O 23          bioremediation of chlorinated hydrocarbon contaminated areas – from
              laboratory to field
              Zsuzsanna Nagymáté (Budapest/Hungary)

14:45         Metagenome assembled genomes from petroleum reservoirs and oil-degrading
O 24          methanogenic enrichments unveiling syntrophic associations for crude oil
              biodegradation
              Isabel Natalia Sierra-García (Bucaramanga/Colombia)

15:00         Molecular design of biotools for metals recycling and bioremediation
IL 9          Paula V. Morais (Lisbon/Portugal)

15:30–18:30   Poster session II
Room          Sala 1 and 2
              See page 32

                                                                                          17
SCIENTIFIC PROGRAMME I WEDNESDAY, 29 MAY

09:00–10:30   Session 7 – Microbiology in the metagenomics era – tools, applications and
              the emergence of a novel tree of life
Chairs        Nikos Kyrpides (Berkeley, California/Unites States)
              Diogo Neves Proença (Coimbra/Portugal)

09:00         Horizonal transfer of antibiotic resistance genes in urban water systems
IL 10         Søren J. Sørensen (Copenhagen/Denmark)

09:30         Microbial community analysis of a Dutch drinking water treatment plant, with a
O 25          special focus on microorganisms involved in N, C and Fe cycling
              Lianna Poghosyan (Nijmegen/The Netherlands)

09:45         Evolution and metabolic diversity of the Thaumarchaeota
O 26          Paul Sheridan (Aberdeen/United Kingdom)

10:00         Populating the tree – expanding our understanding of the metabolic versatility of
O 27          environmental Nitrospira
              Hanna Koch (Nijmegen/The Netherlands)

10:15         Unveiling methanogenic and methanotrophic populations through metagenome
O 28          assembled genomes of enriched Amazonian soils
              Rodrigo Gouvêa Taketani (Piracicaba/Brazil)

10:30–10:45   Industrial exhibition and coffee break

10:45–12:45   Session 8 – the wonders of secondary metabolism – from natural products
              to novel biocatalysts
Chairs        Rodrigo Costa (Lisbon/Portugal), Thomas Wichard (Jena/Germany)

10:45         Role of chemical mediators in aquatic interactions across the
IL 11         prokaryote-eukaryote boundary – the sea lettuce ulva only gets into shape
              with the right bacteria
              Thomas Wichard (Jena/Germany)

11:15         Marine bacteria and fungi as promising source for new antibiotics
O 29          Jutta Wiese (Kiel/Germany)

11:30         Actinobacteria from the South Pacific – chemical diversity of specialized
O 30          metabolites
              Beatriz Cámara (Valparaíso/Chile)

18
SCIENTIFIC PROGRAMME I WEDNESDAY, 29 MAY

11:45         Mutualism is not supported by Fe processing but by growth-related factors in
O 31          Fe-cycling co-cultures
              Rebecca Cooper (Jena/Germany)

12:00         Forest soil bacteria – an underexplored niche of novel biocatalysts for biomass
O 32          conversion
              Camelia Algora (Prague/Czech Republic)

12:15         Exploring a soil metagenome for novel bacterial phyla and biosynthetic gene
O 33          clusters
              Mark Liles (Auburn, Alabama/United States)

12:30         Rhizosphere microbiome mediates systemic root exudation of secondary
O 34          metabolites
              Elisa Korenblum (Rehovot/Israel)

13:00–19:00   Free afternoon
              see page 10

13:00–15:00   COST Session – Sattellite meeting: COST Action HUPLANTcontrol – control of
              human pathogenic microorganisms in plant production systems
Chairs        Gabriele Berg (Graz/Austria)

13:00         Plasmid mediated adaptation of plant-associated bacteria
IL 12         Kornelia Smalla (Braunschweig/Germany)

13:15         The natural resistome of microbial communities in plants and lichens
IL 13         Tomislav Cernava (Graz/Austria)

13:30         Microbial interactions as potential drivers for small scale spatial organisation of
IL 14         the plant root microbiome
              Søren J. Sørensen (Copenhagen/Denmark)

13:45         Evolution of microbiome traits and antibiotic resistances
IL 15         Jan Dick van Elsas (Groningen/The Netherlands)

14:00         The plant microbiome – antimicrobial resistances, inter-connected microbiomes
IL 16         and the one health concept
              Gabriele Berg (Graz/Austria)

14:15         Round table discussion

                                                                                              19
SCIENTIFIC PROGRAMME I WEDNESDAY, 29 MAY

15:15–19:00   Free afternoon
              see page 10

19:00–01:00   Social evening and party
              see page 11

SCIENTIFIC PROGRAMME I THURSDAY, 30 MAY

09:30–11:00   Session 9 – Living in an increasingly aseptic world? Microbiology in the built
              and social environment
Chairs        Célia M. Manaia (Porto/Portugal), Gabriele Berg (Graz/Austria)

09:30         Built environments – new insights into the microbiome and resistome
IL 18         Gabriele Berg (Graz/Austria)

10:00         Drinking water microbiota – astounding biodiversity, almost unexplored
O 35          Antonia Bruno (Milan/Italy)

10:15         Automated diagnostic system for pathogen and resistome profiling in clinical
O 36          and environmental settings
              Rui Pedro Abreu Pereira (Coventry/United Kingdom)

10:30         High-throughput omic approaches to characterize the microbiome-cervix
O 37          frontier during HPV infections and cervical dysplasia
              Filipa Godoy-Vitorino (San Juan/Puerto Rico)

10:45         Bacterial survival in microscopic wetness
O 38          Nadav Kashtan (Rehovot/Israel)

11:00–11:30   Industrial exhibition and coffee break

11:30–13:00   Session 10 – Building a modern microbial ecological theory – conceptual and
              technical advances
Chairs        Francisco Coelho (Aveiro/Portugal), Rodrigo Costa (Lisbon/Portugal)

11:30         What are the mechanisms behind alternative community states and how do we
IL 19         distinguish between them?
              Karoline Faust (Leuven/Belgum)

12:00         Unravelling the ecological processes shaping the microbial rare biosphere
O 39          Xiu Jia (Groningen/The Netherlands)

20
SCIENTIFIC PROGRAMME I THURSDAY, 30 MAY

12:15         Microbial life strategies in the detritusphere – DNA-SIP provides quantitative
O 40          data on carbon utilization by copiotrophs and oligotrophs
              Marie Uksa (Stuttgart/Germany)

12:30         Bacterial warfare – the arsenal goes viral
O 41          João Gama (Tromsø/Norway)

12:45         Mechanisms of interaction between members of a biofilm community
O 42          Scott Rice (Nanyang/Singapore)

13:00–13:15   Farewell and announcements of BAGECO 16
              Rodrigo Costa (Lisbon/Portugal)

                                                                                               21
POSTER SESSION I I MONDAY, 27 MAY

Horizontal gene transfer, mobile genetic elements and antibiotic resistance

P1      Phytochemical composition and antibacterial activity of extracts of Cajanus cajan (L.)
        Millsp., Vernonia amygdalina Delile and Psidium guayava L. used in the treatment of
        diarrheal infections in Benin
        Amadou Afoussatou (Cotonou/Benin)

P2      The impact of sediment concentrations on the survival of blaCTX-M-15-producing E. coli
        in wastewater released to seawater and freshwater
        Yasir Bashawri (Bangor/United Kingdom)

P3      Phaeobacter inhibensDSM 17395 – plasmid conjugation as a smart strategy for niche
        adaptation
        Lukas Birmes (Braunschweig/Germany)

P4      Profiling of naturally occurring antibiotic resistances in plant microbiomes
        Tomislav Cernava (Graz/Austria)

P5      Identifying drivers of antibiotic resistance in UK river systems
        James Delaney (Coventry/United Kingdom)

P6      Improved bacterial hospitality to plasmids
        João Gama (Tromsø/Norway)

P7      Plasmid-associated antibiotic resistance genes in soil metagenomes from Fildes
        Peninsula (King George Island, Antarctica)
        Matías Giménez (Montevideo/Uruguay)

P8      The abundance of plasmids in E. coli increases level of antibiotic resistance in urban
        waterways
        Krassimira Hristova (Milwaukee, Wisconsin/United States)

P9      Detection of population dynamics and low abundant Staphylococcus species in patients
        undergoing prosthetic joint replacement surgery using targeted tuf and 16S rRNA
        sequencing
        Søren Iversen (Copenhagen/Denmark)

P 10    Antibiotic resistance in agricultural soil associated to the application of cow
        manure-derived amendments from ecological and conventional livestock farms
        Leire Jauregi (Derio/Spain)

P 11    cancelled

22
POSTER SESSION I I MONDAY, 27 MAY

P 12   Horizontal spread of transposons – transposition during natural transformation
       Klaus Harms (Tromsø/Norway)

P 13   Hospital microbiome and resistome
       Kaisa Koskinen (Graz/Austria)

P 14   Plasmid-based tools to facilitate studies of polar Psychrobacter spp
       Robert Lasek (Warsaw/Poland)

P 15   Anthropogenic impacts on the environmental resistome in the coastal water of South
       China Sea
       Stanley Lau (Clear Water Bay/Hong Kong)

P 16   Following the mobile resistome through the path of reclaimed wastewater – from
       treatment plants to irrigated crops
       Roberto Marano (Rishon Lezion/Israel)

P 17   Tracking antibiotic resistance genes in the treated wastewater irrigated soil and crops
       Mitiku Mihiret (Midreshet Ben-Gurion/Israel)

P 18   cancelled

P 19   Fungal highways – novel dissemination routs to differentially enrich and selectively
       disperse the antibiotic resistance genes (ARGs) in environment
       Rashid Nazir (Abbottabad/Pakistan)

P 20   Following plasmids and their host genomes in urban wastewater communities by an
       integrative sequencing approach
       Joseph Nesme (Copenhagen/Denmark)

P 21   The impact of plasmid host range on the dissemination of antibiotic resistance genes to
       enterobacteriaceae in the urban wastewater microbiome
       Asmus Kalckar Olesen (Copenhagen/Denmark)

P 22   Detection and quantification of antibiotic resistance genes along the wastewater treatment
       process by TaqMan multiplex qPCR
       Mónica Nunes (Oeiras, Lisboa/Portugal)

P 23   cancelled

P 24   Transfer of tetracycline-resistance genes from manure to soil depends on soil indigenous
       microorganisms
       Eduardo Pérez-Valera (Ceske Budejovice/Czech Republic)

                                                                                                 23
POSTER SESSION I I MONDAY, 27 MAY

P 25    cancelled

P 26    Phenotypic and genomic features of Klebsiella pneumoniae isolates from clinical and
        environmental sources – does the origin matter?
        Jaqueline Rocha (Porto/Portugal)

P 27    Oral administration of antibiotics increased the potential mobility of bacterial resistance
        genes in the gut of the fish Piaractus mesopotamicus
        Johan Sebastian Saenz (Munich/Germany)

P 28    Social interactions influence biofilm formation among wastewater bacteria
        Ana Filipa Silva (Copenhagen/Denmark)

P 29    Physiological and genomic characterization of clinical and environmental strains of an
        opportunistic pathogen Paracoccus yeei (Alphaproteobacteria)
        Magdalena Szuplewska (Warsaw/Poland)

P 30    Comparative genomic analysis in gut microbiomes of broiler and house hold chickens for
        evalauating the status of selected ARGs and MGEs in small scale slaughter houses
        Hassan Waseem (East Lansing/United States)

P 31    Bloodstream bacterial pathogens and their antibiotic resistance patterns in hospitalised
        patients at the yaounde university teaching hospital
        Baiye William Abange (Yaounde/Cameroon)

P 32    Spatial patterns of antibiotic resistance during bacterial range expansions
        Anja Worrich (Leipzig/Germany)

P 33    Thymol mediates bactericidal activity against Staphylococcus aureus by
        binding IolS and enhancing its aldo-keto reductase (AKR) activity
        Xiaohui Zhou (Storrs, Connecticut/United States)

Microbial adaptation, functioning and biodiversity in a changing planet

P 34    Dominance of an unclassified Betaproteobacteria lineage in the spring waters of the Buda
        Thermal Karst System (Hungary)
        Dóra Anda (Budapest/Hungary)

P 35    Effects of precipitation regime and N-availability on the dynamics of plant-microbial and
        soil biogeochemical cycling responses to rewetting
        Romain Barnard (Dijon/France)

24
POSTER SESSION I I MONDAY, 27 MAY

P 36   Carbon source concentration shifts bacterial interactions in snow microcosms
       Benoît Bergk Pinto (Ecully/France)

P 37   Do bacteria shape the soil structure by producing EPS?
       Antje Bettermann (Braunschweig/Germany)

P 38   Dynamics of methane-cycling microbial communities across seasons in Amazonian
       floodplains sediments
       Júlia Brandão Gonitjo (Piracicaba/Brazil)

P 39   Deciphering strategies of a river-sediment microbial community to cope with
       anthropogenic metal contamination
       Valentine Cyriaque (Mons/Belgium)

P 40   Bacterial communities from extreme environments – Vulcano Island (Aeolian Islands,
       Sicily/Italy)
       Sara Del Duca (Sesto Fiorentino/Italy)

P 41   Eco-evolutionary dynamics of ATP-producing pathways in microbial communities
       Jan Dolinsek (Dübendorf/Switzerland)

P 42   Building up and growing a river model bacterial community in different media suggests
       the existence of positive interactions within the community
       Isabelle George (Brussels/Belgium)

P 43   cancelled

P 44   The lingocellulose degrading potential of a thermophilic microbial consortium isolated
       from a thermal springs field in northern Greece
       Dimitris Hatzinikolaou (Zografou, Attica/Greece)

P 45   From pine to pasture – investigating changes in microbial composition and functional
       potential associated with land use conversion
       Syrie M Hermans (Auckland/New Zealand)

P 46   Meta-omics investigation of soil communities along a natural climatic gradient in the
       Finnish Arctic tundra
       Jenni Hultman (Helsinki/Finland)

                                                                                                25
POSTER SESSION I I MONDAY, 27 MAY

P 47   Two Chloroflexi lineages independently evolved the ability to persist on atmospheric
       hydrogen and carbon monoxide
       Zahra Islam (Caulfield North/Australia)

P 48   Novel alkaliphilic and moderately halophilic bacteria harbored by bayonet grass
       rhizosphere soil in Hungarian soda ponds
       Júlia M. Aszalós (Budapest/Hungary)

P 49   Addressing the impact of temperature on Vibrio harveyi adaptation in the time of climate
       change
       Vladimir Kaberdin (Leioa/Spain)

P 50   Microbial community of the meromictic arctic Lake Bolshie Hruslomeny, North European
       Russia
       Vitaly Kadnikov (Moscow/Russia)

P 51   Microbially induced mineral precipitation in serpentinite-hosted alkaline springs of the
       Voltri Massif, Italy
       Aysha Kamran (Göttingen/Germany)

P 52   Functional signatures of the microbiomes of soft corals in health and disease states
       Tina Keller-Costa (Lisbon/Portugal)

P 53   Impact of ecosystem changes due to permafrost thaw on potential greenhouse gas
       emission
       Christoph Keuschnig (Ecully/France)

P 54   Long-term warming impacts moss-associated bacterial community composition and
       competition in Icelandic heathlands
       Ingeborg Klarenberg (Akureyri/Iceland)

P 55   At the playground of evolution in the presence and absence of rivals
       Konrad Korzeniowski (Leuven/Belgium)

P 56   Uncovering the microbiota of the deep-sea sediments from the Southern Gulf of Mexico
       Asunción Lago-Lestón (Ensenada/Mexico)

P 57   Denitrification in Agrobacterium fabrum C58 – genes, regulation and role in fitness
       Solène Lecomte (Villeurbanne/France)

P 58   Anaerobic adaptation of D-glucose PTS-deficient E. coli generates succinic acid
       fermenting cells
       Sang Jun Lee (Anseong/South Korea)

26
POSTER SESSION I I MONDAY, 27 MAY

P 59   Understanding the ecological adaptations and community dynamics of the human gut
       microbiome during Clostridium difficile infection using an in vitro system
       Bettina Lengger (Copenhagen/Denmark)

P 60   Climate changes and land use effects on methane cycling of eastern amazonian soils
       Fernanda Mancini Nakamura (Piracicaba/Brazil)

P 61   CDOM causes shifts in the microbial community in shallow lakes
       Anikó Mentes (Budapest/Hungary)

P 62   Microbial screening of subsurface radioactive water springs in the Czech Republic
       Gabriela Nováková (Prague/Czech Republic)

P 63   Comparative genome analysis reveals habitat-specific adaptations of two Methylocystis
       species from wetlands
       Igor Oshkin (Moscow/Russia)

P 64   Ammonia-oxidizing archaea and bacteria in Amazonian forest soils and floodplain forest
       sediments
       Fabiana Paula (Piracicaba/Brazil)

P 65   Impact of Ag2S NPs on soil bacterial community – a terrestrial mesocosm approach
       Sara Peixoto (Aveiro/Portugal)

P 66   cancelled

P 67   Linking litter microbial communities to substrate quality, environmental conditions and
       decomposition dynamics – insights from two studies using tea bags
       Silvia Pioli (Bolzano/Italy)

P 68   Plasmids in gut environments
       Maraike Probst (Innsbruck/Austria)

P 69   Diversity of Brazilian Soda Lakes’ associated microbiome
       Simone Raposo Cotta (Piracicaba/Brazil)

P 70   Asymmetries in gene expression dynamics as a potential enhancer of microbial resilience
       Andre Ribeiro (Tampere/Finland)

P 71   Calcareous sponge holobiont in a changing ocean
       Bárbara Ribeiro (Rio de Janeiro/Brazil)

                                                                                                 27
POSTER SESSION I I MONDAY, 27 MAY

P 72   Probing the performance of Lactobacillus sanfranciscensis strains in wheat and rye
       sourdough by using CRISPR-locus length polymorphism
       Esther Rogalski (Freising/Germany)

P 73   Towards characterization of microbial interactions – functional annotation by clustering
       orthologous groups
       João P. Saraiva (Leipzig/Germany)

P 74   Nitrification by archaea fuels high nitrous oxide emissions from arctic peatlands
       Henri Siljanen (Kuopio/Finland)

P 75   Farming practices shape the structural and functional diversity of rhizospheric microbial
       community of Cajanus cajan
       Upma Singh (New Delhi/India)

P 76   Targeted meta-genomics evidences role of IS1071 in microbial community adaptation to
       degradation of organic pollutants
       Dirk Springael (Heverlee/Belgium)

P 77   Earth, air and water – oxygen availability influences comammox activity in soil
       Cécile Thion (Ecully/France)

P 78   Global airborne microbial communities controlled by surrounding earth surfaces and
       wind conditions
       Romie Tignat-Perrier (Saint Martin d’Hères/France)

P 79   Moisture differently affects methane microbial communities of forest and pasture soils in
       the Eastern Amazon
       Andressa Monteiro Venturini (Piracicaba/Brazil)

P 80   The function and activity of microbial communities in subarctic soils
       Sirja Viitamäki (Helsinki/Finland)

P 81   Exploring the culturable microbiome diversity and biotechnological potential in corals
       Caren Vilela (Rio de Janeiro/Brazil)

P 82   Identification of key-players in anaerobic alkane oxidation in the diffuse venting Barite
       Field at the Loki´s castle
       Francesca Vulcano (Bergen/Norway)

28
POSTER SESSION I I MONDAY, 27 MAY

Host-microbe interactions – ecology and evolution

P 83    RopB protein of the root nodule bacterium Rhizobium leguminosarum possesses
        amyloid-forming properties
        Mikhail Belousov (Saint Petersburg/Russia)

P 84    Interactions between the wasp Asobara japonica, its endosymbiont Wolbachia, and the
        remainder of the microbiome
        J. Falcão Salles (Groningen/The Netherlands)

P 85    Analysis of bacteria associated to the medicinal plant Origanum vulgare L.
        Lara Mitia Castronovo (Sesto Fiorentino/Italy)

P 86    cancelled

P 87    Exploring the diversity of non-ribosomal peptide and polyketide synthases in rhizosphere
        bacteria
        Barak Dror (Rishon LeZion/Israel)

P 88    The cypsela (achene) of Echinacea purpurea (Asteraceae) as a diffusion unit of a
        community of (micro)organisms?
        Renato Fani (Sesto Fiorentino/Italy)

P 89    Root microbiome changes in response to salt marsh elevation
        Diana Edisa Garcia Hernandez (Groningen/The Netherlands)

P 90    Lichen microbiomes across time and space
        Martin Grube (Graz/Austria)

P 91    Exploring the prokaryotic community associated with the Rumen ciliate
        protozoa population
        Elie Jami (Rishon LeZion/Israel)

P 92    Predatory bacteria and their impact on the microbiome of C. elegans
        Julia Johnke (Kiel/Germany)

P 93    Succession of intestinal microbiota of a Eurasian wigeon while spending a winter
        Takehiko Kenzaka (Tondabayashi/Japan)

P 94    Host genetic selection for cold tolerance shapes microbiome composition and modulates
        its response to temperature
        Fotini Kokou (Be‘er Sheva/Israel)

                                                                                              29
POSTER SESSION I I MONDAY, 27 MAY

P 95    cancelled

P 96    Fate and impact of the antibiotic Sulfametoxazole on soil microbial communities:
        a spatial distribution problem
        Jean M.F. Martins (Grenoble/France)

P 97    Colonization strategies of the dominant bacterium Enteroccus mundtii in the gut of host
        larvae, Spodoptera littoralis
        Tilottama Mazumdar (Jena/Germany)

P 98    Evolution-mediated priority effects in the assembly of gut microbiome and consequences
        for host fitness
        Shinjini Mukherjee (Leuven/Belgium)

P 99    Insights into plant factors driving rhizosphere establishment by Bacillus velezensis
        Marc Ongena (Gembloux/Belgium)

P 100 Surface metabolome together with sea water temperature and trace metals contamination
      shape the surface microbiote of the Mediterranean brown seaweed holobiont Taonia
      atomaria
      Benoît Paix (Toulon/France)

P 101 Chitin-degrading capacities of sponge and octocoral microbiomes
      Rúben R. Silva (Lisbon/Portugal)

P 102 Cultivation dependent studies on the methylome and transcriptome of plant-growth
      associated bacteria
      Manuel Reisinger (Graz/Austria)

P 103 Influence of a high diversity of the microbial community on the persistence of Salmonella
      enterica in agricultural soil
      Jasper Schierstaedt (Braunschweig/Germany)

P 104 Wolbachia endosymbiont geographical distribution in the natural populations of the cotton
      leafhopper, Amrasca devastans
      Muhammad Shafiq (Lahore/Pakistan)

P 105 Constrained chaos in the pathobiome of a new slow-spreading coral disease
      Michael Sweet (Derby/United Kingdom)

30
POSTER SESSION I I MONDAY, 27 MAY

P 106 Plant root-microbiome responses to elevated CO2
      Alla Usyskin-Tonne (Rishon LeZion/Israel)

P 107 Exploring reproductive microbiotas of a sexually promiscuous host
      Liisa Veerus (Oxford/United Kingdom)

P 108 Exploring multi-domain probiotics and chemical remediation of oil-polluted marine waters
      and their impacts on hydrocorals health
      Helena Villela (Rio de Janeiro/Brazil)

P 109 Biodegrading two pesticide residues in rice crops and growth media by a genetically
      engineered approach
      Zhi Min Yang (Nanjing/China)

P 110 The functional repertoire encoded within the C. elegans microbiome
      Johannes Zimmermann (Kiel/Germany)

Host-microbe interactions as driving forces of ecosystems

P 111 From head to toe – PGP Bacterial endophytes in three Mediterranean terrestrial orchid
      species
      Pasquale Alibrandi (Torino/Italy)

P 112 Beneficial microorganisms for Coral (BMC) Growth
      Juliana Assis (Rio de Janeiro/Brazil)

P 113 Investigating ungulate-associated bacterial, plant and parasite communities on a common
      landscape through comparative fecal pellet metabarcode analysis
      William Holben (Missoula, Montana/United States)

P 114 Rhizospheric microbiome selection and enhanced activity associated to Agave
      lechuguillaTorr. from the Chihuahuan desert
      Guadalupe Medina-de la Rosa (San Luís Potosí/Mexico)

P 115 cancelled

P 116 cancelled

P 117 Competition between two holobionts – a multi-omic analysis of in situ coral-algal
      interactions
      Ty Roach (Waialua, Hawaii/United States)

                                                                                              31
POSTER SESSION I I MONDAY, 27 MAY

P 118 Disentangling inter-kingdom and functional traits associated with pulse thermal resistance
      in corals
      Helena Villela (Rio de Janeiro/Brazil)

P 119 Uncovering virus-bacterial host interactions across ecological gradients in soil
      Sungeun Lee (Ecully/France)

P 120 Identifying key components of microbial communities driving major changes in the
      microbiome
      Michael Sweet (Derby/United Kingdom)

P 121 Bacterial community composition change in temperate octocoral, Scleronephthya
      gracillima exposed to heat stress
      Seonock Woo (Busan/South Korea)

POSTER SESSION II I TUESDAY, 28 MAY

Microbiomes for sustainability – boosting agri- and aquaculture ecosystems

P 122 Harnessing the performance of the soil microbiome in agriculture
      Fernando Andreote (Piracicab/Brazil)

P 123 The use of root endophytic bacteria to boost lettuce growth at low temperature conditions
      Persyn Antoine (Ghent/Belgium)

P 124 Long-term agricultural management practices affect rhizosphere microbiota and plant
      health
      Jasper Schierstaedt (Braunschweig/Germany)

P 125 Does the agricultural management affect the priming capacity of barley rhizomicrobiota
      against powdery mildew?
      Nina Bziuk (Braunschweig/Germany)

P 126 Recovering soil quality in vegetable farming systems by reduced tillage and organic
      fertilization and the effect on soil microbiome
      María Victoria Cerecetto (Braunschweig/Germany)

P 127 cancelled

P 128 Integrating an evolutionary perspective to reveal the core microbiome of plant roots
      Francisco Dini-Andreote (Wageningen/The Netherlands)

32
POSTER SESSION II I TUESDAY, 28 MAY

P 129 Seasonal and spatial bacterial variability of the Lake Balaton
      Milán Farkas (Gödöllő/Hungary)

P 130 The impact of microbial diversity loss on phosphorus availability to maize
      Simone Raposo Cotta (Piracicaba/Brazil)

P 131 Metagenomic insights into bacterial succession during vermicomposting of the white
      grape marc Vitis vinifera v. Albariño
      María Gómez Brandón (Vigo/Spain)

P 132 Metabolic potential of Acidobacteria for carbon degradation in soils cultivated with
      sugarcane fertilized with nitrogen and vinasse
      Miriam Gonçalves de Chaves (Piracicaba/Brazil)

P 133 Biochar amendments affected composition and activity of the soil microbial community,
      and the severity of common scab, a soil-borne disease of potatoes
      Jan Kopecky (Prague/Czech Republic)

P 134 Effect of glycerol feed-supplementation on seabass (Dicentrarchus labrax) gut microbiota
      Francisco Coelho (Aveiro/Portugal)

P 135 Humic acid modulates bacterioplankton and fish microbiome in a recirculating
      aquaculture system (RAS)
      António Louvado, Newton C. M. Gomes (Aveiro/Portugal)

P 136 Influence of pea genotype on root associated fluorescent pseudomonads, consequences
      for plant iron nutrition
      Tristan Lurthy (Dijon/France)

P 137 Microbial disruption of the signalling between Sorghum and the parasitic weed Striga
      Raul Masteling (Wageningen/The Netherlands)

P 138 Nitrogen fixation of iron reducing bacteria in rice paddy soils – potent agents for
      sustainable crop production with low nitrogen input
      Yoko Masuda (Bunkyo-Ku/Japan)

P 139 Deliberate introduction of invisible invaders – impact of microbial inoculant to soil
      microbial communities
      Panji Cahya Mawarda (Groningen/The Netherlands)

P 140 Breeding for resistance in common bean drives distinct response to pathogen infection in
      the root system
      Lucas William Mendes (Piracicaba/Brazil)

                                                                                              33
POSTER SESSION II I TUESDAY, 28 MAY

P 141 Comparative genomics reveals high genomic diversity in the drought-tolerant diazotroph
      Susmita Das Nishu (Wonju/South Korea)

P 142 Microbial activity and community in long-term organic and conventional farming systems
      Krista Peltoniemi (Helsinki/Finland)

P 143 Bioinoculants as modulators of rhizospheric microbiome
      Shilpi Sharma (New Delhi/India)

P 144 Microbial ecology of Czech spa thermal springs
      Tereza Šmrhová (Prague/Czech Republic)

P 145 Microbial inoculants as engineers of crop and soil microbiomes – an ecosystem service
      approach
      Ana Soares (Lisbon/Portugal)

P 146 Biological control of green mould disease of Agaricus bisporus by antagonistic Bacillus
      spp. strains
      Olja Stanojević (Belgrade/Serbia)

P 147 Valorization of solid wastes – improvement of soil properties
      Hana Stiborova (Prague/Czech Republic)

P 148 Isolation of lactic acid bacteria with plant growth promotion activities from the
      rhizosphere of wheat at different phenological phases
      Carmine Crecchio (Bari/Italy)

P 149 The microbial ecology of disease suppression in alternative soils for mushroom cropping
      systems
      Tanvi Taparia (Wageningen/The Netherlands)

P 150 Microbiota of white button mushroom (Agaricus bisporus) compost production with
      special emphasis on potential mycotoxin degrading bacteria
      Fanni Tóth (Budapest/Hungary)

P 151 Effects of tillage or no-till on soil aggregates, enzymes, respiration and prokaryotic
      community structure
      Luis Wall (Bernal/Argentina)

P 152 Improvement of a polymeric carrier for efficient cowpea rhizobial formulations
      Gustavo Xavier (Seropédica/Brazil)

34
POSTER SESSION II I TUESDAY, 28 MAY

P 153 Influence of plant residues as a convergence factor on the rhizosphere core microbiome
      of sugarcane and inoculated maize
      Caio Augusto Yoshiura (Piracicaba/Brazil)

Microbiomes for sustainability – environmental pollution and bioremediation: current and
future challenges

P 154 Aerobic and oxygen-limited enrichment of BTEX-degrading biofilm bacteria – dominance
      of Malikia versus Acidovorax species
      Tibor Benedek (Gödöllő/Hungary)

P 155 Microbial bioremediation of aquifer affected from chloroethenes and petroleum
      hydrocarbon contamination
      Martina Bertolini (Milan/Italy)

P 156 Community shift of a mixed culture during benzene degradation under nitrate reduction
      conditions
      João Saraiva (Leipzig/Germany)

P 157 Compositions of enriched bacterial communities involved in the aerobic degradation of
      BTEX and vinyl chloride from chlorinated solvent-contaminated groundwater
      Alif Chebbi (Milan/Italy)

P 158 cancelled

P 159 The impact of bacteriophages in bacteria removal associated with soba stabilisation
      station efficiency
      Ayman Elshayeb (Khartoum/Sudan)

P 160 Characterization of phyllospheric bacterial communities hosted by Platanus x acerifoliain
      European urban areas
      Isabella Gandolfi (Milan/Italy)

P 161 Use of next-generation sequencing to characterize changes in water microbiota across an
      urban watershed in San Juan Puerto Rico
      Eduardo Lemuel-Tosado (San Juan/Puerto Rico)

P 162 Effect of mycorrhizal inoculation on the phytomanagement of polluted soil
      Mikel Anza (Derio/Spain)

P 163 Alien pesticide-degrading bacteria challenged to remove micropollutants from drinking
      water – physiological and ecological consequences of starvation
      Benjamin Horemans (Leuven/Belgium)

                                                                                              35
POSTER SESSION II I TUESDAY, 28 MAY

P 164 Bioremediation of metal-contaminated Doce River Hydrographic Basin based on microbial
      biofilms
      Diogo Jurelevicius (Rio de Janeiro/Brazil)

P 165 Microbial community structure and transformation of xenobiotics in Moscow Free Water
      Surface Treatment Wetland
      Sergey Kharitonov (Moscow/Russia)

P 166 cancelled

P 167 Development of group-specific nosZ primers for quantification of active high-affinity
      nitrous oxide reducing organisms in complex environmental samples
      Daniel D. Kim (Daejeon/South Korea)

P 168 cancelled

P 169 Purification of anaerobically digested livestock slurry with aim to reclaim nutrients and
      water resource from digestates by bioleaching approaches
      Jianru Liang (Nanjing/China)

P 170 Can secondary plant metabolites stimulate bacterial degradation of dioxins and furans?
      Eglantina Lopez-Echartea (Prague/Czech Republic)

P 171 Application of nzvi and cheese whey to aquifer contaminated by chlorinated ethenes:
      effect on autochthonous bacteria and remediation
      Hana Macková (Liberec/Czech Republic)

P 172 Detection of functional genes involved in petroleum biodegradation
      Adonilson Menezes Neto (Salvador/Brazil)

P 173 Evolution of bacterial populations in m-cresol-containing environment
      Ingrem Metsik (Tartu/Estonia)

P 174 Soil loss prevention by rainfall through Microbially Induced Calcite Precipitation (MICP)
      and its application on heavy metals-contaminated soil
      Kyoungphile Nam (Seoul/South Korea)

P 175 Desulfurization of crude oil from bacteria isolated from palaeoenvironmental niche of
      Greece
      Georgia Ntroumpogianni (Athens/Greece)

36
POSTER SESSION II I TUESDAY, 28 MAY

P 176 Biochemical characterization of two nitrilotiracetate monooxygenases from Gordonia
      NB4-1Y thought to mediate the transformation of 6:2 fluorotelomer sulfonate to 6:2
      fluorotelomer aldehyde
      Garret O’Connell (Kamloops/Canada)

P 177 Effect of silicon on the biosorption and accumulation of chromium by arthrobacter
      globiformis 151b type bacteria
      Mariam Osepashvili (Tbilisi/Georgia)

P 178 Molecular and metagenomics investigations in oxidative vinyl chloride biodegradation
      Ilaria Pietrini (San Donato Milanese/Italy)

P 179 Soil moisture-induced enhancement of soil N2O emission linked to distinct response of
      nitrite-reducing and nitrous oxide-reducing microbial communities in acid paddy soil
      Hongling Qin (Changsha/China)

P 180 Microbial community analysis of crude oil/gasoline mixture amended aerobic and hypoxic
       enrichment cultures
      Fruzsina Révész (Gödöllő/Hungary)

P 181 Optimization of the technology to improve the efficiency of microbial degradation of
      chlorinated aliphatic hydrocarbons in contaminated groundwater
      Csaba Romsics (Budapest/Hungary)

P 182 Soil and pharmaceuticals – what shapes microbial community composition in farming
      lands?
      Puspendu Sardar (České Budějovice/Czech Republic)

P 183 Mycotoxin degradation and antifungal activity against mycotoxigenic fungi by
      Streptomyces
      Hong-Gyu Song (Chuncheon/South Korea)

P 184 Catabolism of the common groundwater micropollutant 2,6-dicholorobenzamide (BAM)
      in Aminobacter sp. MSH1 involves two plasmids and an unusual metabolic pathway
      Dirk Springael (Heverlee/Belgium)

P 185 Hedera helix phyllobiome structure and (pan)genomic survey of bacterial isolates with
      regard to phytoremediation of airborne pollutants
      Vincent Stevens (Diepenbeek/Belgium)

P 186 Involvement of bacterial biphenyl dioxygenases in ortho-phenylphenol degradation
      Jáchym Šuman (Prague/Czech Republic)

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POSTER SESSION II I TUESDAY, 28 MAY

P 187 Effects of long-term phytoremediation on rhizosphere and endophytic microbial
      communities at high latitude
      Ondřej Uhlík (Prague/Czech Republic)

P 188 Effects of the endocrine disruptor 17α-ethinylestradiol on bacterial community associated
      with the scleractinean coral Mussismilia harttii
      Caren Vilela (Rio de Janeiro/Brazil)

P 189 Synergism in lignocellulose degrading microbial consortia
      Yanfang Wang (Groningen/The Netherlands)

P 190 Application of endophytic bacteria to reducing PAH contamination of plants
      Xuezhu Zhu (Nanjing/China)

The wonders of secondary metabolism – from natural products to novel biocatalysts

P 191 Bioactive secondary metabolites from octocoral-associated microbes – new chances for
      blue growth
      Rodrigo Costa (Lisbon/Portugal)

P 192 Are biphenyl 2,3-dioxygenases involved in lignin degradation?
      Magdalena Folkmanová (Prague/Czech Republic)

P 193 Identification of novel signaling molecules produced during the cocultivation of probiotic
      strains and Clostridium difficile in in vitro setup
      Thiyagarajan Gnanasekaran (Copenhagen/Denmark)

P 194 Interactions between Streptomyces rapamycinicus and Bacillus subtilis modulate
      production of bioactive molecules
      Tjaša Danevčič (Ljubljana/Slovenia)

P 195 The presence of Isopenicillin N synthase (IPNS) gene in Greek Streptomyces using new
      designed primers and a microwave radiation DNA extraction technique
      Vasiliki Makrygianni (Athens/Greece)

P 196 Attempts to induce present Non-Ribosomal Peptide Synthase (NRPS) genes in Greek
      streptomycete strains
      Christina Michalopoulou (Athens/Greece)

P 197 Evaluating of the metabolic versatility and biotechnological potential of the phenazine
      biosynthesis gene cluster of Streptomyces sp. isolated from the Brazilian tropical dry
      forest
      Itamar Soares Melo (Jaguariúna/Brazil)

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