A Neutralizing IL-11 Antibody Improves Renal Function and Increases Lifespan in a Mouse Model of Alport Syndrome

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A Neutralizing IL-11 Antibody Improves Renal Function and Increases Lifespan in a Mouse Model of Alport Syndrome
A Neutralizing IL-11 Antibody Improves Renal Function and
     Increases Lifespan in a Mouse Model of Alport Syndrome

                Journal: Journal of the American Society of Nephrology

           Manuscript ID JASN-2021-04-0577.R1

       Manuscript Type: Original Article - Basic Research

  Date Submitted by the
                        08-Dec-2021
                Author:

Complete List of Authors: Widjaja, Anissa; Duke-NUS Medical School, Cardiovascular and Metabolic
                          Disorders Program
                          Shekeran, Shamini; Duke-NUS Medical School, Cardiovascular and
                          Metabolic Disorders Program
                          Adami, Eleonora ; Duke-NUS Medical School, Cardiovascular and
                          Metabolic Disorders Program; Max Delbruck Centre for Molecular
                          Medicine in the Helmholtz Association, Cardiovascular and Metabolic
                          Sciences
                          Goh, Joyce; Duke-NUS Medical School, Cardiovascular and Metabolic
                          Disorders Program
                          Tan, Jessie; National Heart Centre Singapore, National Heart Research
                          Institute Singapore
                          Viswanathan, Sivakumar; Duke-NUS Medical School, Cardiovascular and
                          Metabolic Disorders Program
                          Lim, Sze Yun; Duke-NUS Medical School, Cardiovascular and Metabolic
                          Disorders Program
                          Tan, Puay Hoon; Duke-NUS Medical School, Cardiovascular and
                          Metabolic Disorders Program; Singapore General Hospital, Department of
                          Anatomical Pathology; National University Singapore Yong Loo Lin School
                          of Medicine, Department of Anatomy
                          Hubner, Norbert; Max Delbruck Centre for Molecular Medicine in the
                          Helmholtz Association, Cardiovascular and Metabolic Sciences; DZHK;
                          Charité Universitätsmedizin Berlin
                          Coffman, Thomas; Duke-NUS Medical School, Cardiovascular and
                          Metabolic Disorders Program
                          Cook, Stuart; Duke-NUS Medical School, Cardiovascular and Metabolic
                          Disorders Program; National Heart Centre Singapore, National Heart
                          Research Institute Singapore; MRC London Institute of Medical Sciences

                          Alport syndrome, fibrosis, Interleukin 11, podocyte, Therapy, glomerular
              Keywords:
                          disease, glomerulosclerosis, chronic kidney disease

                        Journal of the American Society of Nephrology
A Neutralizing IL-11 Antibody Improves Renal Function and Increases Lifespan in a Mouse Model of Alport Syndrome
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1
2
3              Authors: Widjaja, Anissa; Shekeran, Shamini; Adami, Eleonora ; Goh, Joyce; Tan, Jessie; Viswanathan,
4
               Sivakumar; Lim, Sze Yun; Tan, Puay Hoon; Hubner, Norbert; Coffman, Thomas; Cook, Stuart
5
6
7              Title: A Neutralizing IL-11 Antibody Improves Renal Function and Increases Lifespan in a Mouse Model
8              of Alport Syndrome
9
10             Running title: IL11 antibody therapy in mouse model of Alport syndrome
11
12             Manuscript Type: Original Article - Basic Research
13
14
15             Manuscript Category: Chronic kidney disease
16
17
               Funders: Fondation Leducq, (Grant / Award Number: '16CVD03')
18             National Medical Research Council, (Grant / Award Number: 'MOH‐CIRG18nov‐0002','NMRC
19             Centre Grant ','NMRC/OFYIRG/0053/2017','NMRC/STaR/0029/2017')
20             Medical Research Council, (Grant / Award Number: )
21             European Union Horizon 2020 Research And Innovation, (Grant / Award Number: 'AdG788970')
22             Tanoto Foundation, (Grant / Award Number: )
23
24
               Financial Disclosure: CUST_FINANCIAL_DISCLOSURE :No data available. S.A.C. is a co-inventor of the
25
26
               patent applications: WO/2017/103108 (TREATMENT OF FIBROSIS), WO/2018/109174 (IL11
27             ANTIBODIES), WO/2018/109170 (IL11RA ANTIBODIES). S.A.C. and A.A.W are co-inventors of the patent
28             application: US US2020/0270340A1 (Treatment of Kidney Injury) and GB2009292.0. (Treatment and
29             prevention of disease caused by Type IV collagen dysfunction). S.A.C. is a cofounder and shareholder of
30             Enleofen Bio PTE LTD, a company that made anti IL11 therapeutics, which were acquired for further
31             development by Boehringer Ingelheim in 2019. A. Widjaja reports Patents and Inventions: Boehringer
32             Ingelheim. S. Cook reports Research Funding: Boehringer Ingelheim. T. Coffman reports Advisory or
33             Leadership Role: Editorial Boards: Cell Metabolism and JCI, Singapore Health Services Board of Directors,
34
               Singapore Eye Research Institute, and Kidney Research Institute University of Washington. P. Tan
35
36             reports Honoraria for delivering talk on Prostate cancer - AstraZeneca. All other authors declare no
37             competing interest.
38
39             Study Group/Organization Name: CUST_STUDY_GROUP/ORGANIZATION_NAME :No data available.
40
41             Study Group Members’ Names: CUST_STUDY_GROUP_MEMBERS :No data available.
42
43
44
               Total number of words: 3385
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46             Abstract: Background: Alport syndrome is a genetic disorder characterized by a defective glomerular
47             basement membrane, tubulointerstitial fibrosis, inflammation, and progressive renal failure. IL-11 was
48             recently implicated in fibrotic kidney disease but its role in Alport syndrome is unknown
49             Methods: We determined IL-11 expression by molecular analyses and in an Alport syndrome mouse
50             model. We assessed the effects of a neutralizing IL-11 antibody (X203) versus an IgG control in Col4a3-/-
51             mice (lacking the gene encoding a type IV collagen component) on renal tubule damage, function,
52
               fibrosis, and inflammation. Effects on lifespan of X203, the IgG control, an angiotensin-converting
53
54             enzyme inhibitor (ramipril), or ramipril+X203 were also studied.
55             Results: In Col4a3 mice, as kidney failure advanced, renal IL-11 levels increased and IL-11 expression
56             localized to tubular epithelial cells. The IL-11 receptor IL11RA is expressed in tubular epithelial cells and
57
58
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60                                             Journal of the American Society of Nephrology
A Neutralizing IL-11 Antibody Improves Renal Function and Increases Lifespan in a Mouse Model of Alport Syndrome
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3    podocytes and is upregulated in tubular epithelial cells of Col4a3 mice. Administration of X203 reduced
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     albuminuria, improved renal function, and preserved podocyte numbers and levels of key podocyte
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6
     proteins that are reduced in Col4a3 mice; these effects were accompanied by reduced fibrosis and
7    inflammation, attenuation of epithelial-tomesenchymal transition, and increased expression of
8    regenerative markers. X203 attenuated pathogenic ERK and STAT3 pathways, which were activated in
9    Col4a3 mice. Median lifespan of Col4a3 mice was prolonged 22% by ramapril, 44% with X203, and 99%
10   with amipril+X203.
11   Conclusions: In an Alport syndrome mouse model, renal IL-11 is upregulated, and neutralization of IL-11
12   reduces epithelial-to-mesenchymal transition, fibrosis, and inflammation, while improving renal
13   function. Anti-IL-11 combined with ACE inhibition synergistically extends lifespan. This suggests that a
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     therapeutic approach targeting IL-11 holds promise for progressive kidney disease in Alport syndrome.
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60                                 Journal of the American Society of Nephrology
A Neutralizing IL-11 Antibody Improves Renal Function and Increases Lifespan in a Mouse Model of Alport Syndrome
Page 3 of 23

               Copyright 2022 by ASN, Published Ahead of Print on 2/9/22, Accepted/Unedited Version
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3              Significance Statement
4
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6              Alport syndrome, a genetic disorder of the glomerular basement membrane, frequently leads
7              to end-stage renal failure. In an animal model of Alport syndrome—mice lacking the gene
8              Col4a3—angiotensin-converting enzyme (ACE) inhibition is protective. The authors show
9              that IL-11 is upregulated in the renal tubular epithelia of Col4a3-/- mice; IL-11’s receptor,
10
11
               expressed on podocytes and tubule cells, is upregulated in the diseased kidneys of Col4a3-/-
12             mice. Giving 6-week-old Col4a3-/- mice a neutralizing IL-11 antibody (X203) reduced
13             pathological ERK and STAT3 activation and limited epithelial-to-mesenchymal transition;
14             reduced kidney fibrosis, inflammation, and tubule damage; and improved kidney function.
15
               Median lifespan of Col4a3-/- mice was prolonged 22% by ramapril alone, 44% with X203
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17             alone, and 99% with ramipril+X203. These data suggest that anti-IL-11 therapies hold
18             promise for treating kidney disease in Alport syndrome.
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                                         Journal of the American Society of Nephrology
A Neutralizing IL-11 Antibody Improves Renal Function and Increases Lifespan in a Mouse Model of Alport Syndrome
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     Copyright 2022 by ASN, Published Ahead of Print on 2/9/22, Accepted/Unedited Version
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3    A Neutralizing IL-11 Antibody Improves Renal Function and Increases Lifespan in a
4    Mouse Model of Alport Syndrome
5
6
7
     Anissa A. Widjaja1†*, Shamini Guna Shekeran1†, Eleonora Adami1,2, Joyce Goh Wei Ting1,
8
9
     Jessie Tan3, Sivakumar Viswanathan1, Lim Sze Yun1, Tan Puay Hoon1,4,5, Norbert
10   Hϋbner2,6,7, Thomas M. Coffman1, Stuart A. Cook1,3,8*
11
12   Affiliations:
     1Cardiovascular and Metabolic Disorders Program, Duke-National University of Singapore
13
14   Medical School, Singapore.
15   2Cardiovascular and Metabolic Sciences, Max Delbrück Center for Molecular Medicine in the

16   Helmholtz Association (MDC), 13125 Berlin, Germany.
17   3National Heart Research Institute Singapore, National Heart Centre Singapore, Singapore.
18   4Department of Anatomical Pathology, Singapore General Hospital, Singapore, Singapore.
19   5Department of Anatomy, Yong Loo Lin School of Medicine, National University of
20
21   Singapore, Singapore, Singapore.
     6DZHK (German Centre for Cardiovascular Research), Partner Site Berlin, 13347 Berlin,
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23   Germany.
     7Charité-Universitätsmedizin, 10117 Berlin, Germany.
24
25   8MRC-London Institute of Medical Sciences, Hammersmith Hospital Campus, London, UK.

26
27
28   †These authors contributed equally to this work
29
30   *Correspondence to:
31
32
     Anissa A. Widjaja and Stuart A. Cook
33   Email: anissa.widjaja@duke-nus.edu.sg and stuart.cook@duke-nus.edu.sg
34   8 College Road 169857
35   Duke-NUS Medical School, Singapore
36   Phone: (65) 660102584
37
38   Fax: (65) 6221 2534
39
40
41
42
     Running title: IL-11 Antibody and Alport Syndrome
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51
52
53   Abstract
54
55
56   Background Alport syndrome is a genetic disorder characterized by a defective glomerular
57   basement membrane, tubulointerstitial fibrosis, inflammation, and progressive renal failure.
58   IL-11 was recently implicated in fibrotic kidney disease but its role in Alport syndrome is
59
     unknown.
60

                               Journal of the American Society of Nephrology
A Neutralizing IL-11 Antibody Improves Renal Function and Increases Lifespan in a Mouse Model of Alport Syndrome
Page 5 of 23

               Copyright 2022 by ASN, Published Ahead of Print on 2/9/22, Accepted/Unedited Version
1
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3              Methods We determined IL-11 expression by molecular analyses and in an Alport syndrome
4
               mouse model. We assessed the effects of a neutralizing IL-11 antibody (X203) versus an
5
6              IgG control in Col4a3-/- mice (lacking the gene encoding a type IV collagen component) on
7              renal tubule damage, function, fibrosis, and inflammation. Effects on lifespan of X203, the
8              IgG control, an angiotensin-converting enzyme inhibitor (ramipril), or ramipril+X203 were
9              also studied.
10
11
12
               Results In Col4a3-/- mice, as kidney failure advanced, renal IL-11 levels increased and IL-11
13             expression localized to tubular epithelial cells. The IL-11 receptor IL11RA is expressed in
14             tubular epithelial cells and podocytes and is upregulated in tubular epithelial cells of Col4a3-/-
15             mice. Administration of X203 reduced albuminuria, improved renal function, and preserved
16
               podocyte numbers and levels of key podocyte proteins that are reduced in Col4a3-/- mice;
17
18             these effects were accompanied by reduced fibrosis and inflammation, attenuation of
19             epithelial-to-mesenchymal transition, and increased expression of regenerative markers.
20             X203 attenuated pathogenic ERK and STAT3 pathways, which were activated in Col4a3-/-
21             mice. Median lifespan of Col4a3-/- mice was prolonged 22% by ramapril, 44% with X203, and
22
               99% with amipril+X203.
23
24
25             Conclusions In an Alport syndrome mouse model, renal IL-11 is upregulated, and
26             neutralization of IL-11 reduces epithelial-to-mesenchymal transition, fibrosis, and
27             inflammation, while improving renal function. Anti-IL-11 combined with ACE inhibition
28             synergistically extends lifespan. This suggests that a therapeutic approach targeting IL-11
29
               holds promise for progressive kidney disease in Alport syndrome.
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                                           Journal of the American Society of Nephrology
A Neutralizing IL-11 Antibody Improves Renal Function and Increases Lifespan in a Mouse Model of Alport Syndrome
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     Copyright 2022 by ASN, Published Ahead of Print on 2/9/22, Accepted/Unedited Version
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2
3    Introduction
4
     Alport syndrome (AS) is caused by mutation in the A3/4/5 genes that encode chains of type
5
6    IV collagen1,2. These mutations lead to abnormalities in glomerular basement membrane
7    (GBM) collagen composition, integrin-mediated podocyte dysfunction, glomerular
8    hypertension, and ultrafiltration3,4. AS affects up to 60,000 people in the United States and is
9    associated with hearing loss, ocular abnormalities, and chronic renal disease (CKD).
10
11
             In the commonest form of disease due to X-linked mutation of COL4A5, 90% of
12   affected males develop end-stage kidney failure by the age of 405. Early disease can
13   manifest as hematuria, microalbuminuria or proteinuria and while there are no specific
14   therapies, affected children are commonly treated with an angiotensin converting enzyme
15
     inhibitor (ACEi), based in part on extrapolation of studies conducted in Col4a3-/- mice6 and
16
17   supported by more recent data from clinical trials7,8.
18           The Col4a3-/- mouse strain is widely viewed as one of the best animal models of
19   progressive AS. In seminal studies, treatment of four-week-old Col4a3-/- mice with an ACEi
20   (ramipril), prior to onset of proteinuria and tubulointerstitial fibrosis, attenuated kidney
21
     dysfunction and prolonged lifespan6. However, if ramipril treatment of Col4a3-/- mice was
22
23   delayed until seven weeks of age, after proteinuria was established, there was limited
24   beneficial effect6,9. There are no specific or second-line medical therapies for AS and renal
25   transplantation is the prefered treatment for progressive CKD in AS10.
26           Kidney dysfunction in AS is initiated in the glomerulus, related to altered GBM
27
     mechanics and podocyte dysfunction. However, as in other primary glomerular diseases, a
28
29   major determinant of progressive kidney failure is in the associated tubulointerstitial
30   disease4. Indeed, similar to other forms of CKD, kidney function in AS patients correlates
31   most strongly with the degree of tubulointerstitial fibrosis, rather than glomerular pathology11.
32   Disease pathogenesis in AS is complex, involving renin angiotensin system and TGFβ
33
34   activation, inflammation, partial epithelial-mesenchymal transition (pEMT) of tubular
35   epithelial cells (TECs)/podocytes and fibrosis, among other factors9,12,13. Increasingly the role
36   of pEMT, a failed-repair proximal tubule cell (FR-PTC) state14, is viewed as an initiating
37   factor for renal fibrosis, inflammation and failure, particularly as it prevents TEC proliferation
38
     and renal repair15–20.
39
40           Here we investigated whether (1) IL11, recently implicated as important for
41   tubulointerstitial fibrosis and renal dysfunction21, is involved in the kidney pathology of AS
42   and (2) a neutralizing IL11 antibody given to Col4a3-/- mice with established renal disease
43   and proteinuria could improve molecular pathology, renal structure and function, and delay
44
     onset of death due to kidney failure.
45
46
47   Methods
48   Antibodies
49   Cyclin D1 (55506, CST), E-Cadherin (3195, CST), p-ERK1/2 (4370, CST), ERK1/2 (4695,
50
51
     CST), GAPDH (2118, CST), GFP (ab6673, Abcam), IgG (11E10, Aldevron), neutralizing
52   anti-IL11 (X203, Aldevron), anti-IL11RA (X209, Aldevron), NHPS2/Podocin (ab181143,
53   Abcam), PCNA (13110, CST), αSMA (19245, CST; WB), SNAI1 (3879, CST, WB), p-STAT3
54   (4113, CST), STAT3 (4904, CST), TGFβ (3711, CST), Wilms’ Tumor 1 (ab89901, Abcam, IF
55
     and IHC), Wilms’ Tumor 1 (ab267377, Abcam, WB), anti-goat Alexa Fluor 488 (ab150129,
56
57   Abcam), anti-rabbit Alexa Fluor 647 (ab150067, Abcam), anti-rabbit HRP (7074, CST), anti-
58   mouse HRP (7076, CST).
59
60   Ethics statements

                                Journal of the American Society of Nephrology
A Neutralizing IL-11 Antibody Improves Renal Function and Increases Lifespan in a Mouse Model of Alport Syndrome
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               Copyright 2022 by ASN, Published Ahead of Print on 2/9/22, Accepted/Unedited Version
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2
3              Animal studies were carried out in compliance with the recommendations in the Guidelines
4
               on the Care and Use of Animals for Scientific Purposes of the National Advisory Committee
5
6              for Laboratory Animal Research (NACLAR). All experimental procedures were approved
7              (SHS/2019/1482) and conducted in accordance with the SingHealth Institutional Animal
8              Care and Use Committee.
9
10
11
               Mouse model of Alport
12             Col4a3-/- (Col4a3tm1Dec) mice were purchased from The Jackson Laboratory
13             (https://www.jax.org/strain/002908). Mice were housed in temperatures of 21-24℃ with 40-
14             70% humidity on a 12 h light/12 h dark cycle and provided with food and water ad libitum.
15
               For treatment study, Col4a3-/- were administered 20mg/kg of anti-IL11 (X203) or IgG isotype
16
17             control (11E10) by intraperitoneal (IP) injection starting from 6 weeks of age twice a week for
18             2.5 weeks; wild-type littermates were used as controls. Mice were sacrificed for blood and
19             kidney collection when they were 8.5-week-old. For lifespan study mice were
20             intraperitoneally administered either X203 (twice a week, 20 mg/kg) or 11E10 (twice a week,
21
               20 mg/kg) alone or in combination with ramipril (10 mg/kg; 6 days/week) starting from 6
22
23             weeks of age, until death ensued.
24             Col4a3-/--Il11:EGFP
25             Col4a3-/- mice were crossed to transgenic mice with EGFP constitutively knocked-in to the
26             Il11 gene22 to generate hybrid cross of Col4a3-/- -Il11:EGFP+/-. Age-matched Col4a3+/+ -
27
28
               Il11:EGFP+/- littermates were used as controls. Mice were sacrificed at 7.5 weeks of age;
29             kidneys were excised and OCT-embedded for immunofluorescence staining.
30
31             Western Blot
32             Western blot was carried out on total protein extracts from mouse kidney tissues. Kidneys
33
34             were lysed in radioimmunoprecipitation assay (RIPA) buffer containing protease and
35             phosphatase inhibitors (Thermo Scientifics), followed by centrifugation to clear the lysate.
36             Protein concentrations were determined by Bradford assay (Bio-Rad). Protein lysates were
37             separated by SDS-PAGE, transferred to PVDF membrane, and subjected to immunoblot
38
               analysis for various antibodies (1:1000 in TBST) as outlined in the main text, figures, or
39
40             and/or figure legends. Proteins were visualized using the ECL detection system (Pierce) with
41             the appropriate secondary antibodies: anti-rabbit HRP or anti-mouse HRP (1:2000 in TBST).
42
43             Quantitative polymerase chain reaction (qPCR)
44
               Total RNA was extracted from snap-frozen kidney tissues using Trizol (Invitrogen) followed
45
46             by RNeasy column (Qiagen) purification. cDNAs were synthesized with iScriptTM cDNA
47             synthesis kit (Bio-Rad) according to manufacturer’s instructions. Gene expression analysis
48             was performed on duplicate samples with either TaqMan (Applied Biosystems) or fast SYBR
49             green (Qiagen) technology using StepOnePlusTM (Applied Biosystem) over 40 cycles.
50
51             Expression data were normalized to GAPDH mRNA expression and fold change was
52             calculated using 2-∆∆Ct method. The sequences of specific TaqMan probes and SYBR green
53             primers are available upon request.
54
55
               Colorimetric assays
56
57             The levels of blood urea nitrogen (BUN) and creatinine in mouse serum were measured
58             using Urea Assay Kit (ab83362, Abcam) and Creatinine Assay Kit (ab65340, Abcam),
59             respectively. Urine albumin and creatinine levels were measured using Mouse Albumin
60

                                          Journal of the American Society of Nephrology
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3    ELISA kit (ab108792, Abcam) and Creatinine Assay Kit (ab204537, Abcam), respectively. All
4
     ELISA and colorimetric assays were performed according to the manufacturer’s protocol.
5
6
7    Histology
8    Kidney tissues were fixed for 48 hours at RT in 10% neutral-buffered formalin (NBF),
9    dehydrated, embedded in paraffin, and sectioned at 7μm. Transverse kidney sections were
10
11
     then stained with periodic acid Schiff (PAS) and Masson’s Trichrome according to standard
12   protocol. Images of the sections were captured by light microscopy and blue-stained fibrotic
13   areas were semi-quantitatively determined with Image-J software (color deconvolution-
14   Masson’s Trichrome) from the whole kidney area (100X field, n=4 kidneys/group). Kidney
15
     sections (n=4-7/group) were independently scored for tubulointerstitial fibrosis (from
16
17   Masson’s Trichrome- stained kidney sections) and for glomerulosclerosis and tubular
18   atrophy (from PAS-stained kidney sections) by a renal pathologist in a blinded fashion with
19   the following criteria:
20       ● Interstitium (0, no fibrosis; 1, less than 25% fibrosis; 2, 25% to 50% fibrosis; 3, more
21
              than 50% fibrosis).
22
23       ● Glomeruli (0, no sclerosis; 1, less than 25% sclerosis; 2, 25% to 50% sclerosis; 3,
24            more than 50% sclerosis).
25       ● Tubules (0, no atrophy; 1, less than 25% atrophy; 2, 25% to 50% atrophy; 3, more
26            than 50% atrophy).
27
         ● Total score is the sum of interstitial fibrosis score, glomeruli score, and tubule atrophy
28
29            score.
30   Treatment and genotypes were not disclosed to investigators performing the histology and
31   generating semi-quantitative readouts.
32
33
34   Immunohistochemistry
35   Kidneys were fixed in 10% neutral-buffered formalin (NBF), paraffinized, cut into 7μm
36   sections, incubated with primary antibodies overnight and visualized using the appropriate
37   ImmPRESS HRP IgG polymer detection kit: anti-rabbit (MP-7401, Vector Laboratories), anti-
38
     mouse (MP-7402, Vector Laboratories) with ImmPACT DAB Peroxidase Substrate (SK-
39
40   4105, Vector Laboratories). Quantification of WT+ve cells were performed in a blinded fashion
41   from 4 images (200X field)/kidney (n=3-4 kidneys/group).
42
43   Immunofluorescence
44
     Kidneys were rinsed in cold PBS and patted dry with a lint free paper and cryo-molded in
45
46   OCT compound (4583, Tissue-TekⓇ). After the OCT compound is frozen, kidney specimens
47   were wrapped in aluminium foil and stored in -80oC. Cryo-embedded kidneys were
48   cryosectioned (-20°C) at 7 µm thickness and allowed to dry on the slides for 1 hour (RT).
49
     Kidney sections were fixed in cold acetone for 15 min prior to brief PBS washes,
50
51   permeabilized with 0.1% TritonX-100 (T8787, Sigma), and blocked with 2.5% normal horse
52   serum (S-2012, Vector Labs) for 1 hour (RT). Kidney sections were incubated with GFP and
53   WT1 (1:500 in PBS containing 0.1% Tween20) primary antibodies overnight (4°C), followed
54   by incubation with the appropriate Alexa Fluor 488/647 secondary antibodies (1:250) for 1
55
56
     hour (RT). DAPI was used to stain the nuclei prior to imaging by fluorescence microscope
57   (Leica).
58
59   Statistical analyses
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                                Journal of the American Society of Nephrology
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3              Statistical analyses were performed using GraphPad Prism software (version 8). Statistical
4
               significance between control and experimental groups were analysed by two-sided Student’s
5
6              t tests or by one-way ANOVA as indicated in the figure legends. P values were corrected for
7              multiple testing according to Tukey when several conditions were compared to each other
8              within one experiment. Comparison analysis for two parameters from two different groups
9              were performed by two-way ANOVA. The criterion for statistical significance was P < 0.05.
10
11
12             Results
13             IL11 is upregulated in the kidneys of Col4a3-/- mice.
14             IL11 is not expressed in normal healthy tissues but its induction is commonly seen in
15
               fibroinflammatory diseases23. We profiled the Il11 mRNA expression in kidneys of Col4a3-/-
16
17             mice and found it to be upregulated (17.8-fold, P
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3    mass (Figure 2C) and had significantly less kidney fibrosis by both biochemical and
4
     histological assessments (Figure 2D-F).
5
6
7
8             Gene expression analyses showed renal levels of extracellular matrix genes (Col1a1,
9    Col1a2, Col3a1 and Fn), the myofibroblast marker Acta2 and pro-fibrotic factors (Il11 and
10
11
     Tgfb1) were all reduced by X203 as compared to IgG (Figure 3A). The effect seen on
12   transcript expression was confirmed at the protein level for alpha-smooth muscle actin
13   (⍺SMA) and fibronectin (Figure 3B).
14            At the signaling level, IL11 is known to activate ERK across cell types and this
15
     pathway has been mechanistically linked with IL11-driven fibrosis26,28,29. IL11 inhibition in
16
17   vivo can also be associated with reduced STAT3 activation, which is thought to be largely a
18   secondary phenomenon reflecting lesser stromal-driven inflammation26,30. As compared to
19   wild-type mice, kidneys from Col4a3-/- mice treated with IgG exhibited elevated ERK and
20   STAT3 activation, in contrast ERK and STAT3 phosphorylation was largely diminished in
21
     kidneys of X203-treated Col4a3-/- mice (Figure 3,B and C). These data are consistent with
22
23   X203 target engagement in the kidney, reduced ERK activation and diminished
24   inflammation.
25            In many kidney diseases, it is thought that damaged TECs transition to a pEMT/FR-
26   PCT state, which is central to the subsequent development of tubulointerstitial fibrosis and
27
28
     CKD15–18. TEC pEMT/FR-PCT14 is characterised by increased SNAI1 expression and
29   reciprocal downregulation of E-Cadherin that is regulated, in part, by TGFβ15,16. As
30   compared to wild-type controls, Col4a3-/- mice receiving IgG exhibited a strong molecular
31   signature of EMT with increased SNAI1 and decreased E-Cadherin expression (Figure 3,B
32   and C). In contrast, SNAI1 and E-Cadherin levels in Col4a3-/- mice receiving X203 were
33
34   similar to those seen in wild-type mice. Thus, anti-IL11 reduces TEC pEMT in the kidneys of
35   Col4a3-/- mice.
36            A specific feature of injured TECs that enter a pEMT/FR-PCT state is their inability to
37   replicate, a process that relates to SNAI1 repression of Cyclins D1/2 that blocks G1/S
38
     transitions19,20,31. We profiled levels of Cyclin D1 and those of PCNA, a marker of G1/S, in
39
40   kidneys of Col4a3-/- mice treated with either IgG or X203 and also in WT controls. Col4a3-/-
41   mice receiving X203 showed marked upregulation of Cyclin D1 and PCNA, as compared to
42   WT mice and Col4a3-/- mice receiving IgG (Figure 3,B and C). This suggests anti-IL11
43   inhibits pEMT/FR-PCT transitions in the kidneys of Col4a3-/- mice and releases TECs to
44
     reenter G1/S, to replicate and to repair damaged tubules.
45
46
47   Podocyte preservation and lesser renal inflammation is associated with inhibition of
48   IL11 signaling in Col4a3-/- mice.
49   AS affects GBM composition leading to podocyte dysfunction/loss that relates to TGFβ
50
51   activity and pEMT processes in both podocytes and TECs9,18. Immunohistochemistry
52   analysis of the podocyte marker WT1 revealed a greater staining in wild-type mice and
53   X203-treated Col4a3-/- mice, as compared to IgG-treated Col4a3-/- mice (Figure 4A).
54   Quantification of the number of WT1-positive cells (podocytes) was carried out in a blinded
55
     fashion and confirmed significant (P=0.0002) preservation of podocyte integrity in Col4a3-/-
56
57   mice receiving X203 as compared to Col4a3-/- mice receiving IgG (Figure 4B). Preservation
58   of podocytes in X203-treated Col4a3-/- mice was further ascertained by immunoblotting and
59   findings were extended to Podocin, a second podocyte marker (Figure 4, C and D).
60

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2
3                       TGFβ upregulation in podocytes and tubular cells, which coincides with the onset of
4
                proteinuria in the Col4a3-/- mouse9,32, is thought of importance for disease pathogenesis in
5
6               AS. We thus examined TGFβ levels and observed that X203, but not IgG, significantly
7               reduced the degree of TGFβ upregulation in the kidneys of Col4a3-/- mice (Figure 4, C and
8               D). Apoptosis of podocytes and tubule cells is implicated in AS and caspase activity is
9               reduced in Col4a3-/- mice given Olmesartan32. We observed caspase 3 activation in the IgG-
10
11
                treated Col4a3-/- mice that was reduced by X203 administration (Figure 4, C and D).
12                      Tnf⍺ expression in podocytes is of particular importance in AS and leads to podocyte
13              apoptosis and glomerulosclerosis13. It was therefore notable that X203 reduced Tnf⍺
14              expression in Col4a3-/- mice, as compared to IgG treated controls (Figure 4E). Markers of
15
                tubule damage and inflammation were also assessed. As compared to wild-type mice,
16
17              control Col4a3-/- mice had elevated indicators of tubule damage (Kim1 and Ngal), which were
18              restored by X203 administration towards the levels seen in WT mice (Figure 4E).
19              Proinflammatory interleukins (Il6 and Il1b) and CC chemokines (Ccl2 and Ccl5) were also
20              elevated in Col4a3-/- mice receiving IgG and were equally diminished by administration of
21
                X203 (Figure 4E).
22
23
24
25              Inhibition of IL11 signaling improves kidney histopathology and function
26              Next, we tested whether inhibition of IL11 signaling, which mitigated intermediate
27
28              phenotypes of kidney pathology in Col4a3-/- mice, also improved renal structure and function.
29              To determine the effect of anti-IL11 therapy on kidney pathology, kidney sections stained
30              with periodic acid Schiff (PAS) and Masson’s Trichrome were evaluated by a renal
31              pathologist who was blinded to treatments, and the severity of pathological features
32
                including fibrosis, glomerulosclerosis and tubular atrophy were assigned a composite score
33
34              (see methods for scoring details). Compared to IgG-treated mice, X203 treatment was
35              associated with diminished levels of tubular atrophy and interstitial fibrosis, consistent with
36              our internal analysis (Figure 2F), while glomerulosclerosis was completely abrogated, and
37              the overall damage score was significantly reduced (Figure 5A-D).
38
                        To assess renal function, we measured blood urea nitrogen (BUN), serum creatinine
39
40              (Cr) and urinary albumin:creatinine ratios at the end of the anti-IL11 monotherapy study (at
41              8.5 weeks of age). As compared to wild-type mice, IgG-treated Col4a3-/- mice had elevated
42              BUN, Cr and urinary ACR levels (fold elevation compared to wild-type: 12.4, 7.3, 13.6,
43              respectively), whereas administration of X203 from week 6 lowered BUN, Cr and urinary
44
45
                ACR to levels seen in WT mice, consistent with a significant overall improvement in renal
46              function (Figure 5E-G).
47
48              Anti-IL11 extends lifespan in Col4a3-/- mice
49              Death from progressive renal failure typically occurs in Col4a3-/- mice starting from 8.5 weeks
50
51              of age and mean survival times are reproducibly reported at around 10 weeks (e.g. 71 days6;
52              69 days33). Untreated Col4a3-/- mice used for the studies described here had a mean survival
53              of 62.7±1.9 days. Previous studies have shown that administration of ramipril from four
54              weeks of age, prior to the onset of proteinuria and before IL11 is expressed (Figure 1B),
55
                extends lifespan in Col4a3-/- mice whereas initiation of ramipril from seven weeks of age,
56
57              when disease is established, does not6. We sought to determine if anti-IL11 could extend
58              lifespan when initiated at six weeks of age, after proteinuria is present and IL11 is
59              upregulated in the kidneys, and compared its effects to ramipril alone or ramipril combined
60              with anti-IL11, also administered from six weeks of age (Figure 6A).

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2
3            As compared to untreated controls, administration of IgG had no effect on survival
4
     (Figure 6, B and C). In contrast, ramipril significantly extended median lifespan by 22% (14
5
6    days), whereas anti-IL11 alone increased median lifespan by 44% (29 days) (Figure 6, B
7    and C). Notably, anti-IL11 combined with ramipril acted synergistically to further extend
8    median lifespan of Col4a3-/- mice by 99% (62 days) (Figure 6, B and C). This suggests that
9    anti-IL11 and ramipril inhibit different pathological processes in the diseased kidneys of
10
11
     Col4a3-/- mice.
12
13   Discussion
14   Blockade of the renin-angiotensin system (RAS) is a mainstay of therapy for patients with AS
15
     and other forms of CKD, but unfortunately progression to end-stage renal failure is typical in
16
17   individuals with aggressive AS5,10. This shortcoming likely reflects the complex renal
18   pathology of progressive AS, involving GBM-specific initiating factors and generic
19   tubulointerstitial disease mechanisms that cannot be completely ameliorated by RAS
20   blockade alone. Here we identify IL11 as a novel cause of kidney injury in AS and show that
21
     inhibition of IL11 has independent and additive therapeutic benefits relative to ACE inhibition
22
23   in Col4a3-/- mice.
24            IL11 is a misunderstood cytokine22,23 that is secreted from a variety of stromal and
25   epithelial cells in response to cellular injury to act in an autocrine and paracrine manner
26   causing epithelial cell dysfunction, stromal cell activation and inflammation23. In the kidney
27
     parenchyma, IL11RA is expressed on TECs throughout the nephron and in podocytes, two
28
29   key cell lineages that can be affected by pEMT, an initiating factor for kidney fibrosis,
30   inflammation and failure in a range of different kidney diseases15–18. IL11RA is also
31   expressed on stromal fibroblasts and vascular smooth muscle cells34 and is important for
32   myofibroblast transformation23.
33
34            One mechanism for kidney protection by inhibition of IL11 signaling in Col4a3-/- mice
35   could be through inhibition of pEMT. In support of this, X203 reduced SNA1 expression,
36   central to EMT/pEMT15,16,35, and restored E-cadherin levels31, while preserving podocyte
37   numbers and expression of podocyte-specific proteins17 (Figure 7). Furthermore, X203
38
     dosing of Col4a3-/- mice induced substantial upregulation of renal Cyclin D1 and PCNA
39
40   expression associated with SNAI1 inhibition, suggesting escape of TECs from pEMT/FR-
41   PCT, restoration of TEC proliferation, and kidney repair19,20,31.This effect could be related to
42   suppression of TGFβ, a determinant of pEMT in the kidney15,16,18, as anti-IL11 lowered TGFβ
43   expression. However, while inhibition of TGFβ signaling is proinflammatory36 we show here,
44
     as we have in other tissues, that inhibition of IL11 reduces inflammation26,34. Thus pEMT/FR-
45
46   PCT in the kidney may be driven by IL11 itself, similar to reports of its effects in fibrotic lung
47   disease and cancer37,38.
48            While pEMT of damaged podocytes and TECs may initiate renal pathology, the
49   consequent activation of stromal and inflammatory cells is needed for disease progression.
50
51
     Indeed, deletion of Il11ra1 in fibroblasts diminishes pathogenic ERK signaling and protects
52   against kidney dysfunction in folic acid nephropathy21. It is therefore likely that some of the
53   effects of X203 in Col4a3-/- mice, are mediated through inhibition of IL11-dependent
54   myofibroblast activation (Figure 7), which in addition to reducing fibrosis also STAT3
55
     phosphorylation and IL6 levels. IL6 is linked with a range of kidney diseases and, while not a
56
57   therapeutic target itself, IL6 may serve as a biomarker for latent IL11 activity39. Interestingly,
58   urinary IL11 levels correlate with proteinuria in IgA nephropathy and lupus nephritis and
59   perhaps might be useful for patient stratification40. This also suggests IL11 may be important
60   in other diseases of the renal glomerulus, which remains to be explored.

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2
3
4
                        The Col4a3-/- mouse line has been a useful model of progressive AS and death from
5
6               kidney failure typically occurs between 63 (this study) and 71 days6,33. A previous study
7               showed that ACEi extended lifespan of Col4a3-/- mice by 79 days (110%) when initiated at
8               four weeks of age, before renal IL11 is upregulated. However, there was no survival benefit
9               if ACEi was initiated at seven weeks of age, after kidney injury was established. Here we find
10
11
                that ACEi therapy started in six-week-old Col4a3-/- mice modestly extended lifespan by 14
12              days (22%). In contrast, anti-IL11 monotherapy begun at six weeks of age was more
13              effective than ramipril alone, increasing lifespan by 29 days (44%). Most notably, the
14              combination of anti-IL11 and ramipril prolonged survival of Col4a3-/- mice by 62 days (99%),
15
                which is substantially longer than ACEi alone, the current standard of care in AS patients.
16
17                      Except for limited and incompletely penetrant developmental defects of teeth and
18              skull sutures, humans with loss-of-function of IL11RA appear well with normal immune
19              function. A similar phenotype is seen in Il11ra1 null mice. Interestingly, two recently and
20              separately developed Il11 null mice appear normal with no obvious bony deficits41,42
21
                suggesting that inhibiting IL11 might have advantages in side effect profile over targeting
22
23              IL11RA. Taken together, the mild phenotypes of humans and mice lacking IL11RA or IL11,
24              along with absence of untoward effects with lengthy anti-IL11RA and anti-IL11 treatment in
25              mice26, provide an encouraging safety signal for long-term inhibition of IL11 signaling in
26              chronic diseases, like AS23,25.
27
                        We end by suggesting that inhibition of IL11 signaling may be considered as a novel
28
29              therapeutic approach for patients with AS, and perhaps other progressive forms of CKDs.
30              Anti-IL11 therapy combined with RAS blockade may be of particular interest given the near
31              ubiquitous use of ACEi/ARB in CKD and the synergistic interaction between anti-IL11 and
32              ACEi therapy shown here. With anti-IL11/anti-IL11RA drugs nearing the clinic it will be
33
34              interesting to see if a therapeutic approach for AS discovered in the Col4a3-/- mouse
35              translates to patients, for a second time6,7.
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60

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2
3    Funding
4
     This research was supported by the National Medical Research Council (NMRC), Singapore
5
6    STaR awards (NMRC/STaR/0029/2017), NMRC Centre Grant to the NHCS,
7    MOH‐CIRG18nov‐0002, MRC-LMS (UK), Tanoto Foundation to S.A.C. A.A.W. is supported
8    by NMRC/OFYIRG/0053/2017. N.H. and S.A.C. are supported by a grant from the Leducq
9    Foundation (16CVD03). N.H. is recipient of an ERC advanced grant under the European
10
11   Union Horizon 2020 Research and Innovation Program (AdG788970).
12
13   Author Contributions
14   CRediT Taxonomy
15
     Anissa Widjaja: Conceptualization, Formal analysis, Investigation, Methodology,
16
17   Supervision, Writing – original draft, Writing – review & editing
18   Shamini Shekeran: Investigation, Methodology, Validation
19   Eleonora Adami: Visualization
20   Joyce Goh: Investigation
21
     Jessie Tan: Investigation
22
23   Sivakumar Viswanathan: Investigation
24   Sze Yun Lim: Investigation
25   Puay Hoon Tan: Formal analysis, Investigation
26   Norbert Hubner: Funding acquisition
27
28
     Thomas Coffman: Methodology, Writing – review & editing
29   Stuart Cook: Conceptualization, Formal analysis, Funding acquisition, Methodology,
30   Supervision, Writing – original draft, Writing – review & editing
31
32   Acknowledgements
33
34   None
35
36   Disclosures
37   S.A.C. is a co-inventor of the patent applications: WO/2017/103108 (TREATMENT OF
38
     FIBROSIS), WO/2018/109174 (IL11 ANTIBODIES), WO/2018/109170 (IL11RA
39
40   ANTIBODIES). S.A.C. and A.A.W are co-inventors of the patent application: US
41   US2020/0270340A1 (Treatment of Kidney Injury) and GB2009292.0. (Treatment and
42   prevention of disease caused by Type IV collagen dysfunction). S.A.C. is a co-founder and
43   shareholder of Enleofen Bio PTE LTD, a company that made anti-IL11 therapeutics, which
44
     were acquired for further development by Boehringer Ingelheim in 2019. A. Widjaja reports
45
46   Patents and Inventions: Boehringer Ingelheim. S. Cook reports Research Funding:
47   Boehringer Ingelheim. T. Coffman reports Advisory or Leadership Role: Editorial Boards:
48   Cell Metabolism and JCI, Singapore Health Services Board of Directors, Singapore Eye
49   Research Institute, and Kidney Research Institute University of Washington. P. Tan reports
50
51   Honoraria for delivering talk on Prostate cancer - AstraZeneca. All other authors declare no
52   competing interest.
53
54
55
56
57
58
59
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56              42. Ng B, Widjaja AA, Viswanathan S, Dong J: Similarities and differences between IL11
57                  and IL11RA1 knockout mice for lung fibro-inflammation, fertility and craniosynostosis.
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                    bioRxiv [Internet] 2020 Available from:
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                    https://www.biorxiv.org/content/10.1101/2020.12.10.420695v1.abstract
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                                           Journal of the American Society of Nephrology
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     Copyright 2022 by ASN, Published Ahead of Print on 2/9/22, Accepted/Unedited Version
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3    Figure Legends
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6    Figure 1. IL11 is upregulated in kidneys of Col4a3-/- mice and IL11RA is expressed in
7    podocytes and renal tubular epithelial cells.
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47   A-C. Renal (A) Il11 RNA (n=8-11/group) and (B-C) IL11 protein expression (n=3/group) in
48   wild-type and Col4a3-/- mice. D. Immunohistochemistry staining of IL11RA with anti-IL11RA
49   (X209) or IgG (11E10) as control on the kidneys of wild-type and Il11ra1-/- mice (scale bars,
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     20 µm; representative of n=3 datasets/group). E. Comparison of Il11ra1 and gp130
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52   expression in mouse kidney cells based on single cell transcriptomic analysis by Park et.
53   al.24. F. Immunohistochemistry staining of IL11RA with X209 on the kidneys of wild-type and
54   Col4a3-/- mice (scale bars, 20 µm; representative of n=3 datasets/group). G.
55   Immunofluorescence images (scale bars, 75 µm; representative of n=3 datasets/group) of
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57   EGFP and Wilm’s Tumor 1 expression in the kidneys of Col4a3+/+-Il11:EGFP+/- and Col4a3-/--
58   Il11:EGFP+/-mice. (A) Data are shown as box-and-whisker with median (middle line), 25th–
59   75th percentiles (box) and min-max values (whiskers); 2-tailed Student’s t-test, (C) data are
60   shown as mean±SD; one-way ANOVA with Dunnett’s correction. FC: fold change.

                               Journal of the American Society of Nephrology
Page 19 of 23

                Copyright 2022 by ASN, Published Ahead of Print on 2/9/22, Accepted/Unedited Version
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3               Figure 2. In Col4a3-/- mice, a neutralizing IL11 antibody (X203) preserves kidney mass
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                and reduces renal fibrosis.
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44              A. Schematic showing therapeutic dosing of Col4a3-/- mice for experimental data shown in
45              B-I. Six-week-old Col4a3-/- mice were administered IgG/X203 (20 mg/kg, 2x/week) for 2.5
46              weeks; wild-type littermates were used as controls (n=8-11/group). B. Body weight (shown
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                as a percentage (%) of initial body weight). C. Kidney weight. D. Total renal collagen content
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49              per mg of kidney weight as measured by quantitative colorimetric determination of
50              hydroxyproline residues obtained by acid hydrolysis of collagen (see methods for more
51              details). E-F. (E) Representative and (F) quantification (from 100X field images) of Masson
52              Trichrome’s staining (representative datasets from n=4/group). (B, F) Data are shown as
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                mean±SD, (C, D) data are shown as box-and-whisker with median (middle line), 25th–75th
55              percentiles (box) and min-max values (whiskers); (B) 2-way ANOVA with Tukey’s correction,
56              (C, D, F,) one-way ANOVA with Tukey’s correction.
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                                          Journal of the American Society of Nephrology
Page 20 of 23

     Copyright 2022 by ASN, Published Ahead of Print on 2/9/22, Accepted/Unedited Version
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3    Figure 3. X203 reduces renal ERK and STAT3 activation, fibrosis, and a signature of
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     epithelial-to-mesenchymal transition in mice with Alport syndrome.
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29   A. Relative renal mRNA expression of pro-fibrotic markers (Col1a1, Col3a1, Il11, Col1a2,
30   Fn, Acta2, and Tgfβ) (n=8-11/group). B-C. (B) Western blots and (C) densitometry analysis
31   of p-ERK, ERK, p-STAT3, STAT3, ⍺SMA, Fibronectin, E-cadherin, SNAI1, PCNA, Cyclin D1,
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33   and GAPDH (n=4/group). (A) Data are shown as box-and-whisker with median (middle line),
34   25th–75th percentiles (box) and min-max values (whiskers), (C) data are shown as
35   mean±SD; (A, C) one-way ANOVA with Tukey’s correction. FC: fold change
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                              Journal of the American Society of Nephrology
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                Copyright 2022 by ASN, Published Ahead of Print on 2/9/22, Accepted/Unedited Version
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3               Figure 4. Inhibition of IL11 signaling with a neutralizing IL11 antibody preserves
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                podocytes and reduces renal inflammation and tubule damage in Col4a3-/- mice. A-E.
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36              Data for experiments shown in schematic Figure 2A. A-B. (A) Representative images
37              (representative datasets from n=3/group) and (B) quantification (from 200X field images) of
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                Wilms’ Tumor 1 (WT1) staining. C-D. (C) Western blots and (D) densitometry analysis of
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40              TGFβ, Cleaved Caspase 3, Caspase 3, Podocin, WT1, and GAPDH (n=4/group). E. Relative
41              renal mRNA expression of kidney injury markers (Kim1 and Ngal), podocyte marker
42              (Podocin), and pro-inflammation markers (Il6, Ccl2, Ccl5, Tnf⍺, and Il1β) (n=8-11/group). (B,
43              E) Data are shown as box-and-whisker with median (middle line), 25th–75th percentiles
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45              (box) and min-max values (whiskers), (D) data are shown as mean±SD; one-way ANOVA
46              with Tukey’s correction. FC: fold change
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                                          Journal of the American Society of Nephrology
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     Copyright 2022 by ASN, Published Ahead of Print on 2/9/22, Accepted/Unedited Version
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3    Figure 5. Inhibition of IL11 signaling in Col4a3-/- mice improves renal histology and
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27   A-G. Data for experiments shown in schematic Figure 2A. (A) Interstitial fibrosis, (B)
28   glomerulosclerosis, (C) tubular atrophy, and (D) total histology composite scores (n=4-
29   7/group). (E) Blood urea nitrogen (BUN), (F) serum Creatinine, (G) urinary
30   albumin:creatinine ratios (n=8-11/group). (A-D) Data are shown as mean±SD, (E-G) data are
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     shown as box-and-whisker with median (middle line), 25th–75th percentiles (box) and min-
33   max values (whiskers); one-way ANOVA with Tukey’s correction.
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                              Journal of the American Society of Nephrology
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