Nationale Forschungsdateninfrastruktur (NFDI) FAIRagro - FAIR Data Infrastructure for Agrosystems - Sprecher: Prof. Dr. Frank Ewert
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Nationale Forschungsdateninfrastruktur (NFDI)
FAIRagro - FAIR Data Infrastructure for Agrosystems
Sprecher: Prof. Dr. Frank Ewert
FAIRagro Community Workshop
23. Juni 2021
Ziele des Community Workshop
• Information / Darstellung FAIRagro als Initiative von NFDI4Agri (wer sind wir ?)
• Information / Vorstellung des Vorhabens (was haben wir vor ?)
• Information / Klärung nächste Schritte (wie geht es weiter ?)
• Feedback / Diskussion
www.fairagro.net 2
NFDI4Agri FAIRagro
NFD4Agri Antrag 2020 eingereicht
Kritikpunkte
• Agrarwissenschaftliche Disziplinen sehr
heterogen
• Wenig Vernetzung zwischen Disziplinen
• Keine systemübergreifenden
Forschungsfragen über die Breite der
use cases
agrarwissenschaftlichen Disziplinen
• Fehlender Reifegrad der.Community
hinsichtlich der integrierten Forschung
zu komplexen Fragestellungen
• NFDI4Agri kann diese Mängel in der
Forschungsintegration nicht erbringen
www.fairagro.net 3
NFDI4Agri FAIRagro
Abstimmung zum weiteren Vorgehen
Fokussierung auf einen Stärkere Einbeziehung Erfahrungen von
kleineren Bereich mit der wiss. Community FAIRagro zur
hohem Reifegrad und und Betonung der Integration weiterer
guter Integration über Nutzersicht Bereiche nutzen
Disziplinen
Nukleus „FAIRagro“ Flagship Use Cases FAIRagro NFDI4Agri
www.fairagro.net 4
FAIRagro - Agrosystem research / Challenges for sustainable crop production
➢ Food and agriculture relevant to all ➢ Crop production is the most ➢ Sustainable crop production needs to meet
Sustainable Development Goals essential part of food and SDGs.
agriculture ➢ Particular important are interactions with
climate, the environemnt and the food
system
Climate Environment
Food
Sustainable
and crop
Agriculture production
Food
www.fairagro.net Modified after JPI FACCE Strategic Research Agenda, 2020 5
FAIRagro - Agrosystem research / Challenges for sustainable crop production
Einführung
Targets for future production systems (EU)
Concrete challenges:
- Climate change and
adaptation/mitigation
- Pesticide reduction
- Improved resource use (water,
nutrients, land, soil)
- SDG compliant agrosystems of
the future
6
Sustainable crop production – challenges across scales
➢ Challenges at different scale
…
Susainable agricultural sectors and food system
Climate Environment Region
Susainable agricultural landscape provision of ecosystem
Sustainable
Landscape services and biodiversity
crop
production
Cropping Susainable crop production and farming systems reduced
system/Field environemntal impacts and improved resource use efficiency
Food Crops with improved yield and yield variability for site- (soil,
Plant/crop climate) and management-specific conditions understanding
GxExM
Modified after JPI FACCE Strategic Research Agenda, 2020
…
www.fairagro.net 7
FAIRagro – Agrosystems related research areas
Plants Soil
e.g., management, e.g., soil
fertilization, productivity,
phenotyping/ physical and
Environment sequence data chemical analyses Animals
e.g., land use, e.g., livestock,
weather, production-related
biodiversity emissions, one
health
Forests
Economics e.g., risk
e.g., yield, product management
chains, food strategies, forest
security simulators, insect
abundance
Time series Geo data Farming 4.0 Sensitive data Legacy data
www.fairagro.net 8
FAIRagro – Selected related disciplines
Crop Soil
Agronomy
Science microbiology
Soil biology
Plant Plant
nutrition pathology
Soil
Plants Soil chemistry
e.g., management, e.g., soil
fertilization, productivity,
phenotyping/ physical and
Breeding sequence data Modelling chemical analyses
Soil physics
Functional Bioinformatics Soil
…
genetics hydrology
www.fairagro.net 9
FAIRagro – Selected related disciplines and scales
…
Crop Agronomy Soil
Science microbiology
Region
Plant
pathology Soil biology
Landscape
Plant Soil
nutrition chemistry
Cropping
system / field
Soil
Breeding
hydrology
Plant/crop
Functional
genetics …
… Bioinformatics Modelling
www.fairagro.net 10FAIRagro – Selected related disciplines and scales Agrosystem domain
…
Plant Soil
Agronomy pathology microbiology
Region
Crop
Soil biology
Science
Landscape
Plant Soil
nutrition chemistry
Cropping
system / field
Soil
Breeding
hydrology
Plant/crop
Functional
genetics …
Bioinformatics Modelling
…
www.fairagro.net 11FAIRagro – Use Cases
… UC2, Assessing tradeoffs for optimal crop nitrogen
management
Region UC3, Learning from
incomplete data
UC6, Towards integrated
Landscape potato modelling with fully
connected information
systems
Cropping
system/Field UC4, Streamlining pest and
disease data to advance
integrated pest management
(IPM)
Plant/crop
UC5,Non-invasive phenotyping with
autonomous robots
… UC1, Exploiting genotype × location × year × management
interactions for sustainable crop production
www.fairagro.net 12RDM challenges
• Many disciplinary and institutional infrastructures
• Restricted access to research data
• Hard to find
• Low interoperability
• Heterogeneous standards (metadata, ontologies)
• Inconsistent regulations on the subsequent use of data
• Handling of sensitive data
www.fairagro.net 13FAIRagro aims and ambitions
Overall aims:
• Develop research data infrastructure for a research area (Agrosystems Research)
• Build community of data providers and users
Ambitions
• Develop next gen data infrastructures to enhance (integrated) research on relevant
problems to advance sustainable crop production
• Demonstrate progress for research
• Integration across disciplines
• Bridging of scales
• Pull RDM activities into other agricultural fields
• Address key challenges for RDM
www.fairagro.net 14FAIRagro - key characeristics (agrosystems nucleus)
• Many disciplines involved
• Primary production (food security), resource degradation, ESS, Biodiversity are key
challenges
• Can build on comprehensive research projects
• Can build on excising data, infrastructures and platforms
• Link to new technologies (robotics, sensing, big data, modelling)
• Larger national and international efforts consortia (PhenoRob, patchCROP, MACSUR,
AgMIP, DSSAT, Bonares, DAKIS, …)
www.fairagro.net 15FAIRagro – available (sensitive) data, examples
Ertragskarten
Beschreibende Sortenlisten Vorrat an organischen Kohlenstoff
Bodenkarten (BÜK100)
Landwirtschaftlichen Flächennutzung
Webber et al., 2020
www.fairagro.net 16FAIRagro – available (sensitive) data, examples
InVeKoS - Integriertes Verwaltungs- und Kontrollsystem Bundes- und Landessortenversuche
Betriebsdaten (Beispiel, Farm
accountancy data network, FADN)
https://www.lfl.bayern.de/iba/agrarstruktur/181 https://www.bundessortenversuch.de
760/index.php
Webber et al., 2020 https://ec.europa.eu/info/food-farming-fisheries/farming/facts-and-figures/farms-farming-and-innovation/structures-
www.fairagro.net 17
and-economics/economics/fadn_enFAIRagro – comprehensive research projects, data providers and users
Cluster of Excellence
www.fairagro.net 18FAIRagro – comprehensive research projects and infrastructures
“Soil as a sustainable resource for the bioeconomy” Research Data
www.fairagro.netFAIRagro – excisting (modelling) plattforms
Scientific Impact assessment and Modelling -
Platform for Advanced Crop and Ecosystem
management
Weather/Climate Temperature HeatStressOnGrain
Radiation Vernal.&Photoresp.
CO2 CO2OnTranspiration CO2OnLUE
Water EvapTranPotential
LintulWaterstress EvapTran
Crop Transpiration
LintulPhenology
Phenology
Growth LintulPartitioning LintulBiomass GecrosCrop
Nutrient Uptake NitrogenDemand
Soil30 Ap Roots LintulRoots Slim Roots
45 Al Nutrients SlimNitrogen SoilCN
75 Water LintulDRUNIR GecrosSoilWater SlimWater Hillflow
Bt1
105 Bt2 Temperature SnowCover SoilTemp
20
https://www.simplace.net/FAIRagro – excisting models The CN wheat functional-structural
plant model
Model aided breeding and management support
Quantify environmental and management effects
model linking
functional structural plant modeling
Evers et al., 2010
Barillot et 21
al., 2016FAIRagro – excisting expertise in model-model and model-data fusion
Bio-physical Socio-economic
GCM
Changes in production quantities
Market
SWHE MAIZ
15
Relative yield changes
C
Crop
M
…
Zimmermann et al., 2017FAIRagro – excisting expertise in model-model and model-data fusion
Genetics Crop physiology Farming system Market
Ewert et al., 2017FAIRagro – excisting expertise in model-model and model-data fusion
Multi-scale crop modelling
framework
Peng et al., Nature Plants, 2020Data providers and users
System for Environmental and Agricultural Modelling;
Linking European Science and Society – EU FP6
Integrated Project
http://www.seamless-ip.org/
https://www.seamlessassociation.org/
Van Ittersum, et al., 2008; Ewert, et al., 2009
www.fairagro.net 25Data providers and users
MACSUR a Knowledge Hub of
FACCE-JPI
Joint Programming Initiative (JPI) on “Agriculture, Food
Security and Climate Change”
https://macsur.eu/
Agricultural Model Intercomparison and
Improvement Project
www.fairagro.net https://agmip.org/
26FAIRagro partners
• Deutsche Zentralbibliothek für Medizin (ZB MED) • Leibniz-Institut für Informationsinfrastruktur (FIZ
Informationszentrum Lebenswissenschaften Karlsruhe)
• Forschungszentrum Jülich • Leibniz-Institut für Pflanzengenetik und
Kulturpflanzenforschung (IPK)
• Johann Heinrich von Thünen-Institut,
Bundesforschungsinstitut für Ländliche Räume, • Leibniz-Zentrum für Agrarlandschaftsforschung
Wald und Fischerei (ZALF)
• Julius Kühn-Institut (JKI), Bundesforschungsinstitut • Rheinische Friedrich-Wilhelms-Universität Bonn
für Kulturpflanzen Institut für Geodäsie und Geoinformation
• Kuratorium für Technik und Bauwesen in der • Senckenberg Gesellschaft für Naturforschung
Landwirtschaft (KTBL)
• Technische Universität München, Hans
• Leibniz-Institut für Agrartechnik und Bioökonomie Eisenmann-Forum, Lehrstuhl Digital Agriculture
(ATB)
www.fairagro.net 27How can other partners participate in FAIRagro?
What contributions are possible?
Data user Data provider Infrastructure provider
FAIRagro
FAIRagro Use
Use Cases
Cases
FAIRagro Use Cases
Contact us: fairagro@zalf.de
www.fairagro.net 28How can other partners participate in FAIRagro NFDI4Agri?
Proposal 2020 not successful
30 use cases from agricultural disciplines Planned start year of use cases for different disciplines
● Cover the range of community needs Discipline
● Engage directly with users
Economics
● Align work program across use cases
Environment
● Demonstrator of services
● Cooperation with other NFDI consortia Plants
Animals
Representation of use cases across disciplines
Soil
Forests
2022 2023 2024 2025
Start year
Focus of use cases
Training Search Harmonzation
Infrastructure Data quality Data analysis
www.fairagro.net 29How can other partners participate in FAIRagro NFDI4Agri?
Process of including more use cases
…
Agrosystems
…
focus
Process of including a 2nd and 3rd nucleus / research area
www.fairagro.net
Phase I Phase II 30Nationale Forschungsdateninfrastruktur (NFDI)
FAIRagro - FAIR Data Infrastructure for Agrosystems
Sprecher: Prof. Dr. Frank Ewert
FAIRagro Community Workshop
23. Juni 2021You can also read
