Immune microenvironment changes induced by neoadjuvant chemotherapy in triple-negative breast cancers: the MIMOSA- 1 study

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Immune microenvironment changes induced by neoadjuvant chemotherapy in triple-negative breast cancers: the MIMOSA- 1 study
Sarradin et al. Breast Cancer Research   (2021) 23:61
https://doi.org/10.1186/s13058-021-01437-4

 RESEARCH ARTICLE                                                                                                                                    Open Access

Immune microenvironment changes
induced by neoadjuvant chemotherapy in
triple-negative breast cancers: the MIMOSA-
1 study
Victor Sarradin1* , Amélie Lusque2, Thomas Filleron2, Florence Dalenc1 and Camille Franchet3

  Abstract
  Background: The immune microenvironment (IME) of triple-negative breast cancers (TNBCs) and its modulation by
  neoadjuvant chemotherapy (NACT) remain to be fully characterized. Our current study aims to evaluate NACT-
  induced IME changes and assess the prognostic value of specific immune biomarkers.
  Methods: Tumor-infiltrating lymphocytes (TILs) were identified from hematoxylin-eosin-stained sections of paired
  pre- and post-NACT tumor samples from a TNBC cohort (n = 66) and expression of PD-L1, TIM-3, and LAG-3
  evaluated by immunohistochemistry.
  Results: Overall TIL counts and PD-L1 expression did not differ pre- and post-NACT, but there was a response-
  specific statistically significant difference. TIL counts decreased in 65.5% of patients who achieved a pathological
  complete response (pCR) and increased in 56.8% of no-pCR patients (p = 0.0092). PD-L1 expression was significantly
  more frequently lost after NACT in pCR than in no-pCR patients (41.4% vs 16.2%, p = 0.0020). TIM-3 positivity (≥ 1%)
  was significantly more frequent after NACT (p < 0.0001) with increases in expression levels occurring more
  frequently in no-pCR than in pCR patients (51.4% vs 31%). LAG-3 expression significantly decreased after NACT, but
  there was no difference between response groups. Before NACT, a high TIL count (> 10%) was significantly
  associated with better overall survival (OS), p = 0.0112. After NACT, PD-L1 positivity and strong TIM-3 positivity (≥
  5%) were both associated with significantly worse OS (p = 0.0055 and p = 0.0274, respectively). Patients positive for
  both PD-L1 and TIM-3 had the worst prognosis (p = 0.0020), even when only considering patients who failed to
  achieve a pCR, p = 0.0479.
  Conclusions: NACT induces significant IME changes in TNBCs. PD-L1 and TIM-3 expression post-NACT may yield
  important prognostic information for TNBC patients.
  Keywords: Triple-negative breast cancer, Neoadjuvant chemotherapy, Immune microenvironment, Tumor-
  infiltrating lymphocytes, TILs, PD-L1, TIM-3, LAG-3, Immune checkpoint

* Correspondence: victor.sarradin@gmail.com
1
 Department of Medical Oncology, Institut Claudius Regaud, Institut
Universitaire du Cancer de Toulouse, IUCT-Oncopole, 1 avenue Irène
Joliot-Curie, 31059 Toulouse Cedex 9, France
Full list of author information is available at the end of the article

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Immune microenvironment changes induced by neoadjuvant chemotherapy in triple-negative breast cancers: the MIMOSA- 1 study
Sarradin et al. Breast Cancer Research   (2021) 23:61                                                          Page 2 of 11

Background                                                   samples were included in the study (n = 66). Clinico-
Neoadjuvant chemotherapy (NACT) is increasingly used         pathological, treatment, and follow-up data were ex-
to treat early-stage triple-negative breast cancers          tracted from patients’ medical records. The study was
(TNBCs), and NACT response, in particular, the extent        approved by the competent ethical committee. Written
of residual disease post-NACT, yields important prog-        informed consent was obtained from patients.
nostic information [1, 2]. NACT treatment responses
differentiate two groups of patients: those who achieve a    Pathology assessments
pathologic complete response (the pCR group) and have        pCR was defined as the absence of residual invasive can-
a good prognosis and those with residual invasive            cer cells both in the breast (ypT0 or ypTis) and the axilla
disease (the no-pCR group) and a high risk of relapse.       (ypN0).
Patients in the no-pCR group are then either treated            For patients who achieved pCR, we evaluated immune bio-
with adjuvant capecitabine [3] or considered for inclu-      markers in the tumor bed area. One representative paraffin
sion in a clinical trial.                                    block per case has been used for the study. This representa-
  Several TNBC studies have highlighted the association      tive paraffin block was chosen after a comprehensive review
of tumor-infiltrating lymphocytes (TILs) with a good         of all slides of each case in relation to the macroscopic
prognosis [4–13] and with a higher pCR rate after            report. Lymphocytic infiltrates in non-carcinomatous lesions
NACT [4–8, 13–18]. Although TIL counts are standard-         and normal breast structures were disregarded.
ized [19, 20] and routinely assessed, they currently do         Stromal TIL scores were determined from hematoxylin-
not contribute to treatment strategy.                        eosin-stained tissue sections and defined as the percentage of
  In addition to increased TIL counts, the expression of     tumor stromal area comprising mononuclear inflammatory
immune checkpoint (ICP) programmed death ligand 1            cells, according to the International Immuno-Oncology
(PD-L1) appears to be associated with a higher pCR rate      Biomarker Working Group guidelines for assessment before
[14, 21–25] and better disease-free survival (DFS) [4].      [19] and after NACT [20].
Other novel immunological breast cancer (BrCa) targets,         The following antibodies were used to characterize the
such as T-cell immunoglobulin and mucin domain-              immune infiltrate by immunochemistry on whole tissue
containing molecule 3 (TIM-3) [26, 27] and lymphocyte        section: PD-L1 clone SP142 (Ventana Medical Systems),
activation gene 3 (LAG-3) [28, 29], may yield additional     TIM-3 clone AF2365 (R&D Systems), and LAG-3 clone
prognostic information in TNBCs.                             NBP1-85781 (Novus Biologicals) dilution 1:500 Dako
  Although preclinical evidence supports that the anti-      Flex (Dako).
tumor activity of anthracyclines and alkylating agents          Immune cell PD-L1 SP142 staining was quantitated
may be partially mediated through the modulation of          (IC score) using a 4-class grading system, according to
the anti-tumor immune response [30–32], only few             the manufacturer’s recommendations. The proportion of
studies have addressed this issue in TNBCs [33]. Identi-     tumor area occupied by PD-L1 expressing tumor-
fying a potential impact of NACT on the TNBC immune          infiltrating immune cells was scored as follows: IC0 = <
microenvironment (IME) may help optimize the design          1%; IC1 = 1–4%; IC2 = 5–9%; IC3 = ≥ 10%.
of future clinical adjuvant trials for no-pCR patients and      TIM-3-positive cells were quantified as the proportion
may lead to the development of novel biomarkers.             of stained cells in stromal regions. LAG-3-positive cells
  Our study’s primary objective was to evaluate IME          were reported as the number of stained cells in 10 high-
changes induced by NACT in TNBCs. The prognostic             power fields (× 400 magnification) in the strongest stain-
value of immune biomarkers (TILs, PD-L1, TIM-3, and          ing areas. For these two biomarkers, only moderate to
LAG-3) in terms of overall survival (OS) and their asso-     strong staining intensity was considered as positive. Both
ciation with pathological response were also evaluated as    cytoplasmic/membranous and paranuclear dot-like stain-
part of the secondary objectives.                            ing in mononuclear immune cells were quantitated.
                                                                We applied the following thresholds and cutoffs to
Methods                                                      score the number of TILs (cutoff > 10% or > 30%) and
Population                                                   PD-L1 (negative = IC0 versus positive = IC1, IC2, and
We retrospectively identified 212 TNBCs out of a total       IC3), LAG-3 (cutoff > 0 or ≥ 10), and TIM-3 (cutoff ≥1%
of 666 early BrCa patients treated with NACT between         or ≥5%) staining patterns. TIM-3 was only scored as
June 2012 and October 2018 in our Comprehensive              positive if it was ≥ 1% and LAG-3 when it was > 0. The
Cancer Center. TNBC was defined as estrogen and pro-         number of TILs, LAG-3, and TIM-3 were also consid-
gesterone receptor expression < 10% and negative HER2        ered as continuous variables in the statistical analysis.
status. Only patients with available formalin-fixed             We used a composite criterion to identify patients
paraffin-embedded (FFPE) samples from pre-NACT               who were PD-L1 positive and strongly TIM-3 positive
diagnostic biopsies as well as post-NACT surgical            (≥ 5%). We refer to this population as PD-L1+/TIM-3+.
Immune microenvironment changes induced by neoadjuvant chemotherapy in triple-negative breast cancers: the MIMOSA- 1 study
Sarradin et al. Breast Cancer Research      (2021) 23:61                                                               Page 3 of 11

Statistical analysis                                                    analyses were performed using the STATA software ver-
Categorical variables are represented as frequencies and                sion 16 (StataCorp LLC, College Station, TX).
percentages. Quantitative variables are expressed as
medians and ranges (min:max). Comparisons between                       Results
groups were performed using the chi-square test or                      Patient characteristics
Fisher’s exact test for categorical variables and the                   Our study included 66 patients who all received sequential
Mann-Whitney test for quantitative variables. Compari-                  NACT treatments. None of our patients received adjuvant
sons between the level of immune markers before and                     capecitabine. Twenty-nine patients (43.9%) achieved pCR
after NACT were performed using the Wilcoxon signed-                    (pCR group) and 37 did not (56.1%; no-pCR group).
rank test for paired data for quantitative variables and                Patient characteristics and comparisons between pCR and
the McNemar test for categorical variables. For each                    no-pCR groups are shown in Supplementary Table 1.
continuous immune marker, the change post-NACT was
determined as the difference in expression level before                 Immune microenvironment before neoadjuvant
and after NACT.                                                         chemotherapy
  Overall survival (OS) was defined as the time from                    Table 1 presents immune microenvironment marker
surgery to death from any cause or the last follow-up                   expression levels before and after NACT. Before
(censored data). Survival curves were estimated using                   treatment, the median TIL count was 10% (range 1.0:
the Kaplan-Meier method. Univariable analyses were                      95.0) and 10 patients (15.2%) had a TIL count of >
performed using the log-rank test for categorical variables             30%. PD-L1, TIM-3, and LAG-3 were positive in 35
and the Cox proportional hazard model for quantitative                  (53.0%), 21 (31.8%), and 51 (77.3%) patients, respect-
variables.                                                              ively. Nine patients (13.6%) exhibited strong TIM-3
  All statistical tests were two-sided, and a p value < 0.05            staining (≥ 5%). Seventeen patients (25.8%) exhibited
was considered to be statistically significant. Statistical             strong LAG-3 staining (≥ 10 positive cells).

Table 1 Description of the IME characteristics before and after neoadjuvant chemotherapy in the entire population (comparison
with paired-test)
                                                           Before chemo (n = 66)            After chemo (n = 66)
                                                           N (%)                            N (%)
TILs (%)                      Median                       10.0                             10.0                        p = 0.5598
                              (Range)                      (1.0:95.0)                       (1.0:70.0)
TILs                          0–10%                        36 (54.5%)                       35 (53.0%)                  p = 0.8474
                              > 10%                        30 (45.5%)                       31 (47.0%)
TILs                          0–30%                        56 (84.8%)                       58 (87.9%)                  p = 0.5930
                              > 30%                        10 (15.2%)                       8 (12.1%)
PD-L1                         Negative (IC0)               31 (47.0%)                       38 (57.6%)                  p = 0.1936
                              Positive (IC1/2/3)           35 (53.0%)                       28 (42.4%)
TIM-3 (%)                     Median                       0.0                              1.5                         p < 0.0001
                              (Range)                      (0.0:15.0)                       (0.0:20.0)
TIM-3                         < 1%                         45 (68.2%)                       21 (31.8%)                  p < 0.0001
                              ≥1%                          21 (31.8%)                       45 (68.2%)
TIM-3                         0–4%                         57 (86.4%)                       44 (66.7%)                  p = 0.0093
                              ≥5%                          9 (13.6%)                        22 (33.3%)
PD-L1 and TIM-3               Others                       62 (93.9%)                       54 (81.8%)                  p = 0.0209
                              PD-L1+/TIM-3+                4 (6.1%)                         12 (18.2%)
LAG-3 (%)                     Median                       2.5                              3.0                         p = 0.0389
                              (Range)                      (0.0:37.0)                       (0.0:23.0)
LAG-3                         0                            15 (22.7%)                       11 (16.7%)                  p = 0.3173
                              >0                           51 (77.3%)                       55 (83.3%)
LAG-3                         0–9                          49 (74.2%)                       58 (87.9%)                  p = 0.0126
                              ≥10                          17 (25.8%)                       8 (12.1%)
Sarradin et al. Breast Cancer Research     (2021) 23:61                                                                                Page 4 of 11

  LAG-3 was the only immune biomarker significantly                           There was a significant increase in TIM-3 expression
associated with pCR. The pCR rate in LAG-3-positive                         after chemotherapy: TIM-3 was negative in 21 (31.8%)
and LAG-3-negative patients was 53% and 13.4%, re-                          and positive in 45 (68.2%) patients (p < 0.0001). After
spectively (p = 0.0066) (Suppl. Table 2).                                   chemotherapy, 22 patients (33.3%) exhibited strong
                                                                            TIM-3 staining (≥ 5%) (p = 0.0093) (Table 1). This in-
                                                                            crease was observed in both groups but was significantly
Immune changes induced by chemotherapy                                      greater in the no-pCR patient group, with 45.9% of
Post-NACT, the median TIL count for the entire cohort                       no-pCR patients staining strongly (≥ 5%) after
remained unchanged at 10% (range 1:70) (Table 1).                           NACT, compared to 17.2% of patients in the pCR
However, the change in TIL count differed significantly                     group (p = 0.0141) (Suppl. Table 2 and Fig. 1b).
as a function of the NACT response (p = 0.0026), with a                       After NACT, 12 patients (32.4%) were PD-L1+/TIM-3+
median change of − 5 (range of change − 94:60) in the                       in the no-pCR and none in the pCR group (p = 0.0007)
pCR group and + 4 (range of change − 45:55) in the no-                      (Suppl. Table 2).
pCR group (Suppl. Table 3 and Fig. 1a–c). After NACT,                         LAG-3 expression significantly decreased after NACT
there was a statistically significant difference between                    (p = 0.0389) (Table 1), with a median change of − 0.5
the number of TILs scored in the pCR and no-pCR                             (range of change − 27:10) (Suppl. Table 3), but this
groups (median (range) post-NACT: 5% (1:70) in the                          change was not significantly different in the pCR and
pCR group and 15% (5:70) in the no-pCR group, p =                           no-pCR groups (p = 0.1323) (Fig. 1d).
0.0062). After NACT, 8 patients (12.1%) had > 30% TILs (6                     Representative images of immunochemistry staining
in the no-pCR and 2 in the pCR group) (Suppl. Table 2).                     pattern changes are shown in Fig. 2.
  There was no significant difference in PD-L1 expres-
sion pre- and post-NACT in the entire cohort, with                          Association of immune biomarker expression and patient
42.4% (n = 28) patients PD-L1 positive and 57.6% (n =                       outcome
38) PD-L1 negative after NACT (p =0 .1936) (Table 1).                       After a median follow-up of 35.4 months [95% CI 26.5–
This is in contrast with the large and significant differ-                  44.4], 13 patients died (19.7%).
ence detected between the pCR and no-pCR groups after                         Overall survival at 3 years (3yr-OS) was 76.3% [95% CI
chemotherapy, with 23 no-pCR patients (62.2%) and                           61.8–85.9], with a significantly improved OS of patients
only 5 pCR patients (17.2%) PD-L1 positive after NACT                       in the pCR group compared to the no-pCR group
(p = 0.0002) (Suppl. Table 2).                                              (87.5% vs 68.9%, p = 0.0430) (Fig. 3a). Evidence of tumor

 Fig. 1 Changes of the tumor immune microenvironment induced by neoadjuvant chemotherapy. a, b Changes from biopsy (pre-neoadjuvant) to
 surgical tissue sample (post-neoadjuvant) for each patient, in all cases (left), in the no-pCR (middle), and in the pCR groups (right), for tumor-
 infiltrating lymphocytes (TILs) and TIM-3, respectively. c, d Comparison of changes from pre-neoadjuvant to post-neoadjuvant (as % change)
 between the no-pCR and the pCR groups, for TILs and LAG-3, respectively
Sarradin et al. Breast Cancer Research      (2021) 23:61                                                                                   Page 5 of 11

 Fig. 2 Representative images of changes of the immune microenvironment induced by neoadjuvant chemotherapy in one patient who achieved
 pCR and was still in remission 5 years after the surgery (H&E; PD-L1, TIM-3, and LAG-3 immunohistochemistry: × 400 magnification). To note that the
 different pictures presented here were not performed at the same site of the tissue section, and comparison between the localization of the different
 staining must not be carried out. a Baseline H&E of a significant TIL infiltrate (70%), indicative of a good prognosis and predictive of pCR. b Post-
 chemotherapy H&E staining showing a significant decrease in TILs but remaining high (15%). c Strong PD-L1 staining before treatment (IC2). d PD-L1
 staining became negative after chemotherapy (IC0). e TIM-3 staining before treatment was negative (< 1%). f TIM-3 after chemotherapy became
 strongly positive (5%). g Strong LAG-3 staining before treatment (score = 26). h LAG-3 staining decreased after chemotherapy (score = 6)

cell vascular invasion in the surgical tissue samples was                     Immune biomarkers before chemotherapy
a strong indicator of poor prognosis (3yr-OS 33.3% vs                         The only significant prognostic factor associated with a
80.7%; p < 0.0001) (Suppl. Table 4).                                          good prognosis was a TIL count of > 10%, compared to
Sarradin et al. Breast Cancer Research     (2021) 23:61                                                                                  Page 6 of 11

 Fig. 3 Kaplan-Meier curves of overall survival (OS) based on pathologic complete response (pCR) after neoadjuvant chemotherapy (NACT) (a), TIL
 counts before NACT (b), PD-L1 positivity after NACT (c), strong TIM-3 expression after NACT (d), PD-L1 positivity and strong TIM-3 expression after
 NACT (e), and PD-L1 positivity and strong TIM-3 expression after NACT in the no-pCR group (f)

patients with TIL counts ranging from 0 to 10% (3yr-OS                         PD-L1-positive staining and strong TIM-3 positivity
91.2% vs 63.4%, p = 0.0112) (Fig. 3b). For the 10 patients                   were both significantly associated with poor prognoses
with > 30% TILs, the 3yr-OS was 100%. PD-L1 positivity                       (3yr-OS 57.4% vs 89.4%, p = 0.0055 and 58.0% vs 87.1%,
tended to be associated with a better prognosis (3yr-OS                      p = 0.0274, respectively) (Fig. 3c, d). Patients with both
88.4% vs 63.8%) but did not reach statistical significance                   PD-L1+/TIM-3+ tumors had significantly poorer prog-
(p = 0.1111) (Suppl. Table 4). When evaluated as a                           noses (3yr-OS 45.5% vs 84.6%, p = 0.0020) (Fig. 3e).
continuous variable, TIL counts were associated with a                         When evaluated as a continuous variable, TIM-3 was
better OS with a hazard ratio (HR) at 0.95 (0.89–1.00),                      associated with a poorer OS with a HR at 1.10 (1.00–1.22),
but this was not statistically significant (p = 0.063). No                   which was close to be statistically significant (p = 0.051).
association with OS was seen with TIM-3 (HR 1.00,                            No association with OS was seen with TIL counts (HR
p = 0.999) and LAG-3 (HR 0.98, p = 0.534), as con-                           0.98, p = 0.394) and LAG-3 (HR 1.00, p = 0.979), as
tinuous variables (Suppl. Table 5).                                          continuous variables (Suppl. Table 5).
                                                                               Interestingly, patients who were PD-L1 negative on
                                                                             biopsy but became positive after NACT had a worse
Immune biomarkers after chemotherapy                                         prognosis (3yr-OS 19.9%, n = 11) (data not shown).
The association between an increased TIL count and a                           In the no-pCR group, the impact of positive PD-L1
good prognosis was lost after chemotherapy.                                  and TIM-3 staining on OS was similar but no longer
Sarradin et al. Breast Cancer Research   (2021) 23:61                                                                Page 7 of 11

Table 2 Overall survival of the whole cohort at 3 years by surgical specimen (after chemotherapy) immune biomarker expression
and overall survival for the subgroup of patients that failed to achieve pCR (no-pCR group)
                                         Evt/N                  3yr-OS                    95% CI
All patients
  PD-L1                                                                                                               p = 0.0055
     Negative (IC0)                      4/38                   89.4%                     70.6–96.5
     Positive (IC1/2/3)                  9/28                   57.4%                     33.2–75.5
  TILs                                                                                                                p = 0.6312
     0–10%                               6/35                   79.6%                     57.0–91.2
     > 10%                               7/31                   72.5%                     50.6–85.9
  TIM-3                                                                                                               p = 0.0840
     < 1%                                2/21                   93.8%                     63.2–99.1
     ≥ 1%                                11/45                  67.0%                     48.0–80.5
  TIM-3                                                                                                               p = 0.0274
     0–4%                                5/44                   87.1%                     68.6–95.1
     ≥ 5%                                8/22                   58.0%                     33.1–76.4
  LAG-3                                                                                                               p = 0.7750
     0                                   2/11                   88.9%                     43.3–98.4
     >0                                  11/55                  73.5%                     56.9–84.5
  PD-L1 and TIM-3                                                                                                     p = 0.0020
     Others                              7/54                   84.6%                     68.5–92.9
     PD-L1+/TIM-3+                       6/12                   45.5%                     16.7–70.7
No-pCR group
  PD-L1                                                                                                               p = 0.1186
     Negative (IC0)                      3/14                   84.6%                     51.2–95.9
     Positive (IC1/2/3)                  8/23                   58.0%                     33.0–76.5
  TILs                                                                                                                p = 0.8008
     0–10%                               5/16                   72.0%                     41.1–88.6
     > 10%                               6/21                   65.7%                     38.8–83.0
  TIM-3                                                                                                               p = 0.0702
     0–4%                                3/20                   88.7%                     61.4–97.1
     ≥ 5%                                8/17                   50.0%                     24.5–71.0
  PD-L1 and TIM-3                                                                                                     p = 0.0479
     Others                              5/25                   81.3%                     57.3–92.6
     PD-L1+/TIM-3+                       6/12                   45.5%                     16.7–70.7

significant (3yr-OS 58.0% vs 84.6%, p = 0.1186 and 3yr-             Patients in the no-pCR group who were PD-L1 negative
OS 50.0% vs 88.7%, p = 0.0702, respectively) (Table 2).           on core biopsy but became positive after NACT also had
However, dual PD-L1 and TIM-3 positivity identified a             poor prognoses (3yr-OS 29.2%, n = 8) (data not shown).
no-pCR subpopulation that correlated with poor prognoses.
Indeed, PD-L1+/TIM-3+ no-pCR patients had signifi-                Discussion
cantly worse survival outcomes (3yr-OS 45.5% vs                   Our study not only examined changes in TIL counts and
81.3%, p = 0.0479) (Fig. 3f).                                     PD-L1 expression levels in 66 TNBC patients, before
  In the no-pCR group, immune biomarkers evaluated                and after NACT, but is also, to the best of our know-
as continuous variables were not statistically associated         ledge, the first study to evaluate how changes in TIM-3
with OS (Suppl. Table 5).                                         and LAG-3 expression levels correlate with pCR and OS.
Sarradin et al. Breast Cancer Research   (2021) 23:61                                                             Page 8 of 11

  Our study detected an overall cohort median TIL count          98 TNBC patients, of which 30% achieved pCR after
of 10% at baseline, with 15.2% of TNBCs exhibiting               NACT [7]. In a cohort of 72 TNBC patients, Dieci et al.
greater than 30% TILs. These results are consistent with         observed an increase in TILs in residual disease after
several reports in the literature [12–14], albeit that studies   NACT which was associated with improved disease-free
in the literature report higher median TIL counts [5, 7].        survival [4]. In a cohort of 104 TNBC patients, Lee et al.
  PD-L1 was expressed in 53% of cases, which is com-             reported that compared to stable cases, a significant
parable to other reports which use the Ventana SP142             change, either a TIL count increase or decrease, between
antibody [34, 35]. In our cohort, 32% and 77% of tumors          the pre-NACT biopsy and post-NACT residual tumor
expressed TIM-3 and LAG-3, respectively. Results                 tissue sample, was associated with a better prognosis [5].
obtained by Burugu et al. for TIM-3 (28% of TIM-3                Despite the statistical significance of the association, this
positivity) are similar to ours [26]. However, the LAG-3         correlation may be attributed to the overrepresentation
results reported by Burugu et al. and Bottai et al. (33%         of cases with an increased post-NACT TIL count in the
and 18%, respectively) differ from our results [28, 29].         Lee et al. cohort. These data suggest that patients with
This may be attributed to differences in the LAG-3               increased TIL counts who do not achieve pCR after
quantitation methodologies between studies. However,             NACT may benefit from adjuvant ICP inhibitor therapy.
these differences may also reflect the very heterogeneous        Nonetheless, a better characterization of TIL levels is re-
nature of the immune microenvironment in TNBCs                   quired to optimize therapeutic strategies in this patient
which may support a rationale for immune checkpoint              group.
inhibitor and cytotoxic combination treatment to attempt            With regard to PD-L1 expression changes in TNBCs
to increase the pCR rate in this patient group [34–37].          after NACT, Dieci et al. found a significant increase of
  TIL counts before NACT are both a strong prognostic            PD-L1 expression in residual disease which was associ-
factor for OS [4–13] and an established predictor of             ated with an improved DFS of borderline statistical sig-
pCR [4–8, 13–18], which supports the notion that                 nificance [4]. Pelekanou et al. detected decreased PD-L1
chemotherapy responses are at least partially immune             expression in a cohort encompassing all BrCa pheno-
mediated [30–33]. Our study did not detect any signifi-          types and with no-pCR [12]. In another study, the same
cant increases in baseline TIL counts of pCR patients,           authors found that PD-L1 expression was not altered
which may be attributed to a lack of power.                      after NACT, but observed a 15% mean decrease in TILs
  We report a trend of PD-L1 positivity before NACT              [14]. We found no significant change in PD-L1 expres-
correlating with an improved prognosis, but there was            sion after NACT in our entire cohort, but an increase in
no association with pCR, perhaps due to our small sam-           PD-L1 expression in the no-pCR group. We also
ple size. This is in contrast to several other studies that      observed that PD-L1 positivity after NACT was
report a significant association of positive PD-L1 stain-        significantly associated with poor OS in the entire cohort
ing with DFS [4] and pCR [14, 21–25].                            (p = 0.0055) and a trend of poor OS in the no-pCR
  Importantly, we show that positive baseline staining           group (p = 0.1186). The lack of standardized PD-L1 pro-
for LAG-3 but not for TIM-3 was associated with an in-           tocols makes it difficult to draw any conclusions from
creased probability of achieving pCR. We are, to the best        these studies and it is quite possible that the anti-PD-L1
of our knowledge, the first to report this finding. Larger       VENTANA SP142 antibody we used identifies fewer
studies will be required to confirm our observation.             PD-L1-positive patients [38].
  Although several studies have previously reported                 Importantly, our study is the first to report changes in
changes in TIL counts before and after NACT and the              TIM-3 and LAG-3 expression levels before and after
prognostic significance of such changes [4, 5, 7, 12, 14],       NACT in TNBCs and to determine their predictive and
most of these studies did not specifically focus on              prognostic value. We found a significant increase in
TNBCs [12, 14]. The current literature therefore                 TIM-3 expression after NACT and strong TIM-3 ex-
provides no definitive results regarding the prognostic          pression post-NACT to be significant poor prognostic
value of TIL count changes in TNBCs. We report that a            indicators in the entire population (p = 0.0274) and
decrease in TIL count was significantly more frequently          showed a similar trend in the no-pCR group (p =
associated with pCR and conversely, that an increase in          0.0702). Interestingly, in the overall population as well as
TIL count was more often associated with residual dis-           the no-pCR group, patients whose residual disease
ease (Suppl. Table 3). We found that the number of TILs          expressed both PD-L1 and TIM-3 had a worse prognosis
before (but not after) NACT was a significant prognostic         (3yr-OS 45.5%).
marker of 3yr-OS, an association that persisted (close to           These observations suggest that TNBCs remain im-
significance) even when the pCR group was considered             munogenic after NACT and may continue to be subject
independently (data not shown). Our findings are con-            to antitumor immuno-surveillance, as evidenced by the
sistent with observations reported by Castaneda et al. in        increased infiltration of tumor lymphocytes in the no-
Sarradin et al. Breast Cancer Research           (2021) 23:61                                                                                       Page 9 of 11

pCR patient group. This hypothesis provides a rationale                            Authors’ contributions
to explore reactivation of lymphocytes present in re-                              V.S. participated in the conception, design, methodology development,
                                                                                   funding acquisition, data acquisition, analysis and interpretation of data,
sidual disease using adjuvant immunotherapy, such as in                            writing, reviewing, and revision of the manuscript. A.L. participated in the
the current anti-PD-L1 antibody trial (NCT02954874).                               analysis and interpretation of the data, writing, reviewing, and revision of the
In light of strong TIM-3 expression being predictive of a                          manuscript. T.F. participated in the conception, design, and methodology
                                                                                   development. F.D. supervised the study and participated in the conception,
good anti-PD-(L)1 immunotherapy response in a cohort                               design, methodology development, funding acquisition, data acquisition,
of 30 head and neck cancers patients [39] and of anti-                             analysis and interpretation of data, writing, reviewing, and revision of the
TIM-3 antibodies being evaluated alone or in combin-                               manuscript. C.F. supervised the pathology assessments and participated in
                                                                                   the conception, design, methodology development, funding acquisition,
ation with anti-PD-(L)1 therapy in several phase 1 trials                          data acquisition, analysis and interpretation of data, writing, reviewing, and
[40], our own findings, should they be confirmed by                                revision of the manuscript. The authors read and approved the final
larger multicentric studies, support the rational for                              manuscript.

testing immunotherapy adjuvant treatments specifically
                                                                                   Funding
in patients that fail to achieve a pCR.                                            This work was supported by grants from le Comité de la région Occitanie
  Our study is nevertheless limited by its small size and                          (départements 32-81-65) de la Ligue Nationale Contre le Cancer to C.F. and
monocentric nature which reduces its statistical power                             the Groupement Interrégional de Recherche Clinique et d'Innovation Sud-
                                                                                   Ouest Outre-Mer Hospitalier (APIK 2019) to V.S. The sources of funding did
and also limited more substantial subgroup and multi-                              not influence the study design, data collection, analysis, and interpretation of
variate analyses. Moreover, relevant threshold for TIM-3                           results, nor the writing of the report or the decision to submit the article for
expression should be clarified in future studies.                                  publication.

                                                                                   Availability of data and materials
                                                                                   The datasets used and/or analyzed during the current study are available
Conclusions                                                                        from the corresponding author on reasonable request.
In conclusion, TNBCs have heterogeneous IMEs which
are profoundly altered by NACT. After NACT, patients                               Declarations
positive for both PD-L1 and TIM-3 had significantly
                                                                                   Ethics approval and consent to participate
worse prognoses and importantly this correlation per-                              This retrospective research and study collection was reviewed and approved
sisted in the subgroup of patients that failed to achieve a                        by the institutional ethics committee prior to collection (Breast Group of
pCR.                                                                               IUCT, license No: DC-2016-2658, collection No: DC-2016-2656). The
                                                                                   committee approved the patient consent forms (including publication of
                                                                                   research data). Images from tissue specimens are entirely unidentifiable and
Abbreviations                                                                      there are no details on individuals reported within the manuscript. Written
IME: Immune microenvironment; TNBC: Triple-negative breast cancer;                 informed consent was obtained from patients. This study has been declared
NACT: Neoadjuvant chemotherapy; TILs: Tumor-infiltrating lymphocytes;              to the French National Commission for Informatics and Liberties (CNIL):
pCR: Pathological complete response; OS: Overall survival; ICP: Immune             declaration No: MR4014200520.
checkpoint; PD-L1: Programmed death ligand 1; DFS: Disease-free survival;
BrCa: Breast cancer; TIM-3: T-cell immunoglobulin and mucin domain-
                                                                                   Consent for publication
containing molecule 3; LAG-3: Lymphocyte activation gene 3
                                                                                   The consent for publication of research data was included in the consent
                                                                                   forms and approved by the ethical committee.

Supplementary Information                                                          Competing interests
The online version contains supplementary material available at https://doi.
                                                                                   The authors declare that they have no competing interests.
org/10.1186/s13058-021-01437-4.
                                                                                   Author details
                                                                                   1
 Additional file 1: Table S1. Patients characteristics. Non-ductal histo-           Department of Medical Oncology, Institut Claudius Regaud, Institut
 logic subtypes include one metaplastic chondroid (grade 2, no-pCR), one           Universitaire du Cancer de Toulouse, IUCT-Oncopole, 1 avenue Irène
 muco-epidermoid (grade 3, no-pCR) and one epidermoid metaplastic                  Joliot-Curie, 31059 Toulouse Cedex 9, France. 2Department of Biostatistics,
 (grade 3, pCR). Abbreviations: D= docetaxel 100 mg/m2 (D1=D21), wP=               Institut Claudius Regaud, Institut Universitaire du Cancer de Toulouse,
 weekly paclitaxel (80 mg/m2), (F)EC = 5-fluorouracil (500 mg/m2), epirubi-        IUCT-Oncopole, Toulouse, France. 3Department of Pathology, Institut
 cin (100 mg/m2), cyclophosphamide (500 mg/m2). Table S2. Description              Claudius Regaud, Institut Universitaire du Cancer de Toulouse,
 of IME characteristics before and after chemotherapy, as a function of            IUCT-Oncopole, Toulouse, France.
 NACT response (pCR and no-pCR groups). Percentages for the pCR and
 no-pCR groups shown were calculated for each individual row. Table                Received: 22 January 2021 Accepted: 12 May 2021
 S3. Changes of IME characteristics induced by neoadjuvant chemother-
 apy, for the entire population, and as a function of the NACT response
 (pCR and no-pCR groups). Table S4. Overall survival at 3 years according          References
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