Turkey (Meleagris gallopavo) - Blackwell Science Ltd Genetic variation across the historical range of the wild

 
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Molecular Ecology (2002) 11, 643–657

Genetic variation across the historical range of the wild
Blackwell Science Ltd

turkey (Meleagris gallopavo)
K . E . M O C K ,*‡ T . C . T H E I M E R ,* O . E . R H O D E S Jr.,† D . L . G R E E N B E R G * and P . K E I M *
*Department of Biological Sciences, Northern Arizona University, Flagstaff AZ 86011–5640, USA, †Department of Forestry and
Natural Resources, 1159 Forestry Building, Purdue University, West Lafayette, Indiana 47907, USA

                        Abstract
                        Genetic differences within and among naturally occurring populations of wild turkeys
                        (Meleagris gallopavo) were characterized across five subspecies’ historical ranges using
                        amplified fragment length polymorphism (AFLP) analysis, microsatellite loci and
                        mitochondrial control region sequencing. Current subspecific designations based on
                        morphological traits were generally supported by these analyses, with the exception of the
                        eastern (M. g. silvestris) and Florida (M. g. osceola) subspecies, which consistently formed
                        a single unit. The Gould’s subspecies was both the most genetically divergent and the least
                        genetically diverse of the subspecies. These genetic patterns were consistent with current
                        and historical patterns of habitat continuity. Merriam’s populations showed a positive
                        association between genetic and geographical distance, Rio Grande populations showed
                        a weaker association and the eastern populations showed none, suggesting differing
                        demographic forces at work in these subspecies. We recommend managing turkeys to
                        maintain subspecies integrity, while recognizing the importance of maintaining regional
                        population structure that may reflect important adaptive variation.
                        Keywords: AFLP, control region, Meleagris gallopavo, microsatellite, phylogeography, wild turkey

                        Received 15 August 2001; revision received 5 December 2001; accepted 5 December 2001

                                                                             or subspecies ranges. This approach threatens to disrupt
Introduction
                                                                             the historical patterns of genetic diversity and gene flow
The wild turkey is indigenous to North America, and had                      and potentially could lead to increased homogenization of
an historical range that included much of the eastern and                    subspecies and the loss of locally adapted gene complexes
portions of the southwestern United States, northern Mexico                  (Dobzhansky 1940; Templeton 1986; Avise 1992; Dickerman
and southeastern Canada. This historical distribution was                    & Hubbard 1994). In other areas, habitat degradation and
apparently limited by amount of snowfall to the north and                    fragmentation may lead to increased isolation of regional
the lack of adequate water and roost trees to the west. By                   populations, resulting in a loss of local genetic diversity
the early 1900s, the original range of the wild turkey had                   (Lacy 1987; Leberg 1991; Leberg et al. 1994). Thus, the
decreased significantly due to habitat alterations and                       historical patterns of genetic diversity and gene flow need
over-harvesting. Since that time, wild turkeys have been                     to be described for wild turkey before they are lost (Leberg
re-introduced to some areas and translocated to others,                      1991).
particularly in the midwestern and northeastern USA                             Six subspecies of the wild turkey have been recognized:
(Mosby 1949; Mosby 1975; Williams 1981; Kennamer &                           the eastern (Meleagis gallopavo silvestris), Florida (M. g. osceola),
Kennamer 1996). Programmes to introduce turkeys into                         Rio Grande (M. g. intermedia), Merriam’s (M. g. merriami),
new, unoccupied habitat, or to re-introduce them into                        Gould’s (M. g. mexicana), and south Mexican (M. g. gallopavo)
historical habitat, often have not considered historical species             (Stangel et al. 1992). The eastern subspecies inhabits wood-
                                                                             lands ranging from the hardwood forests of the northeastern
Correspondence: Dr K. E. Mock, ‡Present address: Department
                                                                             USA to the oak-hickory forests of the midwestern USA and
of Fisheries and Wildlife, 5210 Old Main Hill, Utah State Univer-            the pine-oak forests of the southeastern USA. Historically,
sity, Logan, UT 84322 – 5210, USA. Fax: 1 435 797 1871; E-mail:              its range was continuous with that of the Florida subspecies
karen@cnr.usu.edu                                                            to the south and the Rio Grande subspecies to the west

© 2002 Blackwell Science Ltd
644 K . E . M O C K E T A L .

                                                                                     Fig. 1 Wild turkey sample population loca-
                                                                                     tions and historical subspecies boundaries
                                                                                     suggested by Schorger (1966). Population
                                                                                     location description and sample sizes are
                                                                                     provided in Table 1.

(Schorger 1966; Williams 1981; Stangel et al. 1992) (Fig. 1).   fragment length polymorphism (AFLP) loci as well micro-
The Merriam’s and Gould’s subspecies occupy ponderosa           satellite analysis and mitochondrial control region sequences.
pine and pine-oak woodlands of the southwestern USA             Using these data sets, we investigated (i) the putative his-
and northern Mexico. Their ranges are currently isolated        torical patterns of genetic diversity across the species’
from those of the other subspecies and from each other by       range using relict populations, (ii) the genetic validity of
tracts of unsuitable desert and grassland habitat. However,     current subspecific designations, and (iii) patterns of gene
the ranges of Merriam’s, Gould’s and Rio Grande subspecies      flow across geographical distance within subspecies.
may have been continuous during the expansion of forest
habitat in the late Holocene.
                                                                Materials and methods
   Current turkey subspecies designations have been based
on body size differences and plumage variation, such as
                                                                Sample acquisition and DNA extraction
wing-barring patterns, body colour and extent and colour
of edging on the tail coverts and rectrices. However, these     Because of the long history of human manipulation of wild
morphological characteristics have not been quantitatively      turkey populations, we focused on those populations that
analysed, and may not be reliable indicators of genetic         most probably represented ‘relicts’ of historical patterns of
divergence (Schorger 1966; Stangel et al. 1992). Preliminary    genetic diversity. We defined these populations as those
genetic analyses demonstrated statistically significant         (i) located within the historical geographical range of the
differences among all except the eastern and Florida            species; (ii) having no recorded introductions; and (iii) having
subspecies, with the Gould’s subspecies being the most          no known extirpations or severe declines that might have
genetically divergent (Mock et al. 2001). However, these        encouraged introductions from other areas or created a
conclusions were based on a limited data set, used a single     genetic bottleneck. We chose populations that were relatively
marker system, and averaged allele frequencies within           evenly distributed across the historical range of each
subspecies rather than assessing genetic patterns among         subspecies to reduce biases due to geographical proximity.
populations. In this study we expand these earlier genetic      Because of their persistence, most of these populations
analyses (Mock et al. 2001) to include additional amplified     have been used extensively as translocation sources during

                                                                     © 2002 Blackwell Science Ltd, Molecular Ecology, 11, 643–657
R A N G E W I D E G E N E T I C A N A L Y S I S O F W I L D T U R K E Y 645

the restoration efforts of the past several decades. Although           obtained from the Yucatan Peninsula, Mexico. All samples
we feel that these populations are the best available                   were obtained at voluntary hunter check stations from 1995
representation of the historical patterns of genetic diversity          to 1999, with the exception of the samples from Colorado
and divergence in wild turkey, we recognize the possibility             and Sonora, and a portion of the samples from Missouri
that undocumented translocations may have altered these                 and South Carolina, which were collected by winter trapping.
patterns to some extent, particularly in the eastern USA.               Tissue samples collected from hunter-killed birds were
We sampled a total of 24 populations, representing 379                  pulverized in the field using razor blades and 0.2–2.0 g was
individuals. These included six eastern populations (total              immediately suspended in 5 mL lysis buffer (Longmire
n = 105), three Florida populations (total n = 46), seven Rio           et al. 1988). Blood samples from trapped birds were obtained
Grande populations (total n = 77), five Merriam’s populations           by jugular venepuncture, and were either collected directly
(total n = 110), and three Gould’s populations (total n = 41)           into heparinized tubes and kept on ice or 0.5 mL was
(Table 1, Fig. 1). Additionally, four tissue samples from               collected into a sterile tube containing 5 mL of lysis buffer.
hunter-killed ocellated turkeys (Meleagris ocellata) were               Blood samples collected into heparinized tubes were

Table 1 Sample population locations, sample sizes and numbers of samples from each population used for various analyses

Population          Location                                            Samples (n)          Mito. (n)         Msat (n)         AFLP (n)

Eastern
ESW                 Scotch WMA*, Alabama                                 20                  10                20                20
EWW                 Waterhorn WMA, S. Carolina                           20                  10                19                20
EOM                 Ozark Mts, Missouri                                  18                   9                18                18
EWV                 various locations, W. Virginia                       19                  10                19                19
EBW                 Black Warrior WMA, Alabama                           18                  10                —                 18
ECL                 Camp Lejeune, N. Carolina                            10                   7                10                10
Totals                                                                  105                  56                86               105
Florida
FAA                 Avon Air Force Base, Florida                         21                  10                21                21
FTL                 Three Lakes WMA, Florida                              9                   9                 9                 9
FBC                 Big Cypress WMA, Florida                             16                  10                16                15
Totals                                                                   46                  29                46                45
Rio Grande
RDW                 James E. Daughtery WMA, Texas                        15                  12                —                 15
REN                 Encino, Texas                                         9                   9                 9                 9
RTC                 Terrell County, Texas                                 5                   5                 5                 5
RGH                 Gene Howe WMA, Texas                                 10                  10                10                10
RKC                 Kleberg County, Texas                                11                  11                11                11
RNL                 private ranch, Nuevo Leon, Mexico                     7                   6                 7                 7
RKW                 Kerr WMA, Texas                                      20                   9                20                20
Totals                                                                   77                  62                62                77
Merriam’s
MCS                 Colorado Springs, Colorado                           20                  10                20                20
MSP                 Spanish Peaks, Colorado                              40                  20                20                40
MSL                 Stoneman Lake, Colorado                              16                  15                16                16
MWM                 White Mountains, Arizona                             22                  21                23                22
MSM                 Ruidoso, New Mexico                                  12                   7                12                12
Totals                                                                  110                  73                91               110
Gould’s
GYS                 Yecora, Sonora, Mexico                               21                  10                21                21
GNS                 northern Sierra Madre, Chihuahua, Mexico             10                   6                10                10
GCS                 central Sierra Madre, Chihuahua, Mexico              10                   9                10                10
Totals                                                                   41                  25                41                41
O                   Ocellated Turkey                                      4                   4                —                —

Mito. = mitochondrial control region sequencing, Msat = microsatellite analysis. Population designations correspond with locations
depicted in Fig. 1. The first letter of each population abbreviation refers to the subspecies designation (E = eastern, F = Florida,
R = Rio Grande, M = Merriam’s, G = Gould’s).
*WMA = wildlife management area.

© 2002 Blackwell Science Ltd, Molecular Ecology, 11, 643–657
646 K . E . M O C K E T A L .

                                                                                             Table 2 Primers used for control region
Primer                            Sequence                             5′-chicken position   sequencing in wild turkeys

LND6-2                            5′-aga aaa atc aca aaa taa gtc a     16683 (+ strand)
H125-2                            5′-act tgc atg tat atg tct agc a      1351 (– strand)
L16750 (Fumihito et al. 1994)     5′-agg act acg gct tga aaa gc        16731 (+ strand)
HD4 (Edwards 1993)                5′-ggt acc atc ttg gca tct tc         1280 (– strand)
NAU313                            5′-gcc acc tgt gaa gaa gcc             681 (– strand)
NAU185                            5′-acg gct tga aaa gcc att gtt gt    16737 (+ strand)

The positions of the 5′ nucleotides of these primers with reference to the chicken (Gallus
gallus) mitochondrial genome (Dejardins & Morais 1990; GenBank NC001323) are provided
in the last column.

suspended in lysis buffer (0.5 mL sample aliquots in 5 mL              Rapid PCR Purification tubes and resuspended in TE buffer
lysis buffer) upon arrival in the laboratory. A 1.5-mL aliquot         (10 mm Tris, 1 mm ethylenediaminetetraacetic acid).
of each of the sample/buffer mixtures was combined with                   Sequencing reactions were performed on these amplicons
500 µg proteinase K and 100 µL 0.1 m dithiothreitol and                using the ABI BigDye™ kit with the forward primers
digested overnight in a 55 °C water bath. DNA extraction               used to produce the amplicon, and sequencing products
was performed using a salt– chloroform technique with                  were precipitated using the manufacturer’s ethanol–
isopropanol precipitation (Mullenbach et al. 1989). The quality        sodium acetate procedure. An ABI 377 sequencer (Applied
and quantity of DNA was assessed by electrophoresis in                 Biosystems Inc., Foster City, CA) was used to generate
0.7% agarose gels stained with ethidium bromide and by                 sequence chromatograms that were manually proofread
comparison to molecular weight and size standards (λ                   and aligned using ABI sequence navigator™ software.
HindIII digest and 100-bp ladder). Only samples yielding               These sequences were aligned with other galliform
predominantly high quality (> 20 kb) DNA were included                 sequences and mutations were mapped relative to previ-
in the study.                                                          ously described conserved areas within the control region
                                                                       (Dejardins & Morais 1990; Quinn & Wilson 1993; Fumihito
                                                                       et al. 1994; Fumihito et al. 1995; Randi & Lucchini 1998).
Mitochondrial control region sequencing and data
                                                                       Nuclear copies of mitochondrial genes can confound
analysis
                                                                       analyses of mitochondrial sequences (Sorenson & Quinn
We sequenced a 438-bp fragment in domain I of the                      1998). However, the confirmation of sequence results with
mitochondrial control region, putatively the most variable             alternate primer pairs, the consistency of results with
portion of the control region in vertebrates (Moritz et al.            different tissue sources, the absence of spurious amplicons
1987; Randi & Lucchini 1998). A summary of the primers                 from blood samples, and the alignment of control region
used for this purpose is provided in Table 2. Control region           sequences with other galliforms all suggest that the ampli-
amplicons were obtained for 249 individual birds using the             cons were mitochondrial in origin.
primers LND6-2 and H125-2, and for eight birds (MSL1,                     The haplotype and nucleotide diversities (π) for each
GYS2, EWW1, EWW4, EWW12, EOM4, EOM6 and FBC1)                          subspecies group were calculated using dna-sp software
using the primers L16750 and HD4. Replicate amplicons                  (Rozas & Rozas 1997). A neighbour-joining tree of mitotypes
were obtained and sequenced as a quality control measure               was created based on the proportion of sequence differ-
for a total of 32 individual birds, or 13% of the samples,             ences among mitotypes using Phylogenetic Analysis Using
using alternative primer sets. These replicates included seven         Parsimony (paup) software (Swofford 1998), assigning the
amplicons obtained using primers LND6-2 and NAU313,                    ocellated turkey sequences to the outgroup. Average
eight amplicons obtained using primers NAU185 and HD4,                 genetic distances of individuals between each pairwise
and 18 amplicons obtained using primers L16750 and HD4.                combination of populations, calculated as the proportion
   Polymerase chain reaction (PCR) amplification reactions             of nucleotide differences, were obtained using mega 2.0
containing 200 µm dNTPs, 2 mm MgCl, 1 × PCR buffer, 0.2 µm             (Kumar et al. 2001). This matrix was used to construct a
primers, 1 U Taq polymerase, and 50 ng DNA in a total                  neighbour-joining tree of populations using ntsys software
volume of 50 µL were run for 35 cycles with an annealing               (Rohlf 1993). Mitochondrial genetic structure (FST) among
temperature of 55 °C. Amplicon quantity and quality were               subspecies was assessed using both the Analysis of Molecular
assessed on 0.7% agarose mini-gels with ethidium bromide               Variation (amova) approach (Weir & Cockerham 1984;
using size (100 bp ladder) and concentration (λ HindIII digest)        Excoffier et al. 1992; Weir 1996; ΦST) and the conventional
standards. Amplicons producing a single, well-defined band             approach (θ) with arlequin software (Schneider et al. 2000).
of approximately 1300 bp were purified using Concert™                  For the amova analysis, a distance matrix of pairwise

                                                                            © 2002 Blackwell Science Ltd, Molecular Ecology, 11, 643–657
R A N G E W I D E G E N E T I C A N A L Y S I S O F W I L D T U R K E Y 647

differences (Nei & Li 1979) was constructed using individual          software (Miller 1997). Standard deviations of θ were
mitotypes. For the calculation of θ, mitotypes were pooled            calculated by jackknifing over loci and 95% confidence
according to neighbour-joining results to reduce diversity.           intervals for θ were generated by bootstrapping across loci
The probability of the observed or greater values of both ΦST         (Miller 1997). Pairwise θ-values between subspecies were
and θ was assessed using 1000 permutations of the data.               calculated using arlequin software (Schneider et al. 2000).
                                                                      The significance of these pairwise values was assessed
                                                                      using 1023 permutations of the data among populations.
Microsatellite analysis
                                                                         Genetic diversity was assessed using microsatellite data
Turkeys were genotyped at five microsatellite loci [TUM6              by calculating Nei’s (1978) unbiased gene diversity (D)
(U79372), TUM12 (U79356), TUM17 (U79312), TUM23                       across all loci within each subspecies and by counting the
(U79332), and TUM50 (U79306)], originally characterized               total number of alleles represented in each subspecies
in domestic turkeys (Huang et al. 1999) and later optimized           across all five loci. In order to assess the significance of
for eastern wild turkeys (Shen 1999). Microsatellite loci             pairwise subspecific differences in D, pairwise differences
were amplified as follows: genomic DNA (30 ng) was used               were calculated on a locus-specific basis and a 95% con-
as a template in a 10-µL reaction mixture containing 0.2 mm           fidence interval for the overall difference was generated
each dATP, dTTP, dGTP and dCTP; 2 pmol each locus-                    using 1000 bootstrap replicates. A 95% confidence interval
specific primer, one of which contained an M13 universal              that did not include zero was taken as evidence of signi-
primer tag at the 5′ end; 0.1 pmol M13 universal primer               ficant difference in D. Because sample size can affect
with IRD florescent dye tag; 1 × reaction buffer containing           the number of alleles observed, the lowest observable
1.5 mm MgCl2, 50 mm KCL, 10 mm Tris–HCL pH 9.0, 0.1%                  frequency was calculated for the Gould’s subspecies, which
Triton X-100; 1.0 U Taq DNA Polymerase (Promega).                     was represented by the smallest number of samples (41).
   PCR reactions were carried out in 96-well microtitre plates        Hence, alleles at frequencies below 0.025 were not counted
and sealed with a microseal A sealing film (MJ Research)              in the total number of alleles.
under the following conditions: a 5-min denaturation step                In order to investigate the possibility of a recent bottle-
at 95 °C; four cycles of 95 °C for 45 s, 68 °C (decreasing by         neck in each subspecies, we used the program bottleneck
2 °C at each cycle) for 5 min; two cycles of 72 °C for 1 min,         (Cornuet & Luikart 1996) to calculate the one-tailed prob-
95 °C for 45 s, 58 °C (decreasing by 2 °C per cycle) for two          ability of excess observed heterozygosity (gene diversity)
minutes, 72 °C for one minute; 31 cycles of 95 °C for 45 s,           at these microsatellite loci relative to the expected gene
54 °C for 2 min, 72 °C for 1 min; terminal extension step of          diversity under the two-phased model of mutation, using
72 °C for 10 min. Products were electrophoresed on Long               the Wilcoxon sign-rank test (Luikart et al. 1998). If a popu-
Ranger Single polyacrylamide gels (FMC Bioproducts) using             lation has undergone a recent bottleneck, it is expected that
a Licor DNA Analyser 4200. Alleles were assigned using                the number of alleles in that population will decline more
RFLPScan (Scanalytics), with commercial molecular weight              rapidly than the gene diversity, leading to excess gene
markers and duplicate individuals as scoring standards.               diversity relative to the expectation based on allele number
   Analysis of these microsatellite loci, each consisting of          (Luikart et al. 1998). Additionally, we used bottleneck
dinucleotide repeats, was performed on 249 samples (Table 1).         (Cornuet & Luikart 1996) to investigate the shape of the
Microsatellite data were analysed in a hierarchical manner            allele frequency distribution, which is expected to deviate
using Tools for Population Genetic Analysis (TFPGA;                   from the l-shaped distribution found in stable populations if
Miller 1997). Hardy–Weinberg genotypic proportions were               there has been a recent bottleneck (Luikart & Cornuet 1997).
tested with TFPGA using a Markov chain approach to esti-                 Microsatellite data were also used to characterize regional
mate the probability of the observed genotypic proportions            patterns of geographical versus genetic distances. Pairwise
(Haldane 1954; Guo & Thompson 1992; Miller 1997).                     θ-values were calculated for all pairs of populations within
   upgma cluster analysis of populations based on a matrix            the eastern, Rio Grande and Merriam’s subspecies and
of Nei’s (1978) unbiased genetic distances was performed              plotted against the corresponding pairwise geographical
using ntsys (Rohlf 1993) software, and the strength of the            distances to provide a visual comparison of patterns among
major internal nodes was assessed by bootstrapping over               subspecies, following Hutchison & Templeton (1999). Mantel
loci with 1000 pseudoreplicates using tfpga software (Miller          testing was used to assess the strength and significance of
1997). In order to compare among- versus within-subspecies            the correlation between the pairwise matrices of θ and dis-
genetic distances, we calculated the average (± SE) pairwise          tance (Mantel 1967) using ntsys software (Rohlf 1993).
Nei’s (1978) unbiased distances between all pairs of
subspecies and populations within each subspecies. The
                                                                      AFLP analysis
strength of genetic structuring at both the population and
subspecific levels was assessed with Weir & Cockerham’s               AFLP marker profiles were generated for 378 individuals
(1984) theta (θ), an estimator of Wright’s FST, using tfpga           (Table 1) using procedures described by Vos et al. (1995)

© 2002 Blackwell Science Ltd, Molecular Ecology, 11, 643–657
648 K . E . M O C K E T A L .

and modified by Travis et al. (1996) and Busch et al. (2000).      Table 3 Mitotypes found in populations of wild turkey (**Gen-
We used a total of eight EcoRI/MseI primer combinations            Bank alignment accession numbers AF486875s–AF487121)
in the second selective amplification (selective nucleotides
                                                                   Mitotype    Populations
ACG/AGC, ACG/AGG, ACG/ACC, AGG/ACG, ACC/
ACG, AGG/ACC, ATC/AGG, and ATC/ACC) to generate                    A           MCS(8), MRM(7), MSL(7), MSM(3), MSP(7),
markers ranging in size from 90 to 500 bp. Polymorphic                         MWM(11)
markers were selected in the absence of sample labels, and         B           MSM(1), MSP(1)
only if they could be scored unambiguously across all              C           MSM(2)
samples. Five per cent of the samples were completely              D           MCS(1), MSL(2), MWM(1)
                                                                   E           MWM(3)
replicated to assess the overall error rate associated with
                                                                   F           MWM(3)
the analysis. The error rate was calculated as the number of       G           MRM(1), MSP(1)
loci with conflicting scores in replicated samples divided         H           MSL(5), MSM(1)
by the total number of loci scored. Because AFLP analysis          I           MWM(2)
produces dominant markers, the assumption of Hardy–                J           RGH(2)
Weinberg genotypic proportions must be made in order to            K           RDW(1), RKW(1), RTC(1), REN(1), RKC(3), RKW(4),
calculate allele frequencies for statistical analysis (Mueller                 MSL(1)
                                                                   L           RDW(3)
& Wolfenbarger 1999). Allele frequencies were estimated
                                                                   M           GNS(5), GCS(9), GYS(10)
based on the frequency of the homozygous recessive allele          N           EWW(5), FAA(2), FBC(5), FTL(4), RDW(2), RGH(3)
using the Taylor expansion approach of Lynch & Milligan            O           FBC(4)
(1994). Cluster analysis, analysis of population and               P           FAA(2), FBC(1), ESW(5), EOM(6), EBW(3), MCS(1),
subspecies genetic structure, gene diversity analysis, and                     MRM(1), REN(1), RGH(3), RKW(1), RTC(3), RKC(1)
analysis of regional patterns of gene flow were performed          Q           EWV(2)
for AFLP data in the same manner as described above for            R           FTL(1), FAA(3)
                                                                   S           ECL(4)
microsatellite data. In addition, the per cent polymorphic
                                                                   T           REN(1), RGH(1), RKC(2), RNL(3)
loci (P) was calculated for subspecies as an independent           U           EBW(3)
measure of genetic diversity. The 95% confidence intervals         V           EOM(1), ESW(2), EWV(1), RDW(2)
were generated for P by scoring each locus as a one                W           EBW(4)
(polymorphic according to the 95% criterion) or a zero             X           EOM(2)
(monomorphic) for each subspecies and performing 1000              Y           FTL(2), EWV(2), FAA(2)
bootstrap replicates.                                              Z           ECL(1), EWV(4), RKC(2), EWW(1)
                                                                   AA          MRM(1), MSP(1), MWM(1)
                                                                   AB          EWW(2)
Results                                                            AC          RDW(2)
                                                                   AD          RDW(1), REN(5), RGH(2), RKC(3), RKW(2), RNL(3)
                                                                   AE          ECL(2), EWW(2)
Mitochondrial sequencing and analysis
                                                                   gnc15       GNC(1)
Alignment of mitochondrial control region sequences from           rdw11       RDW(1)
245 individual birds across all five subspecies (Tables 1 and 3,   rkw3        RKW(1)
                                                                   esw3        ESW(1)
excluding the ocellated turkey) yielded 42 mitotypes, with
                                                                   esw1        ESW(1)
31 polymorphic nucleotide sites, 23 of which were phylo-           eom5        EOM(1)
genetically informative (Table 3). All informative nucleotide      ewv6        EWV(1)
variation was in the form of transitions, and most mito-           ftl1        FTL(1)
types differed by only one to two mutations. Mutations             ftl9        FTL(1)
among wild turkeys occurred primarily in clusters between          faa23       FAA(1)
known conserved areas in domain I of the galliform control         ren3        REN(1)
region (Randi & Lucchini 1998). The neighbour-joining
                                                                   Numbers in parentheses following the population codes refer to
tree describing phylogenetic relationships among mitotypes         the number of individuals within each population.
suggested a lack of diagnostic structure among the eastern,
Florida and Rio Grande mitotypes, but strong clustering of
the Merriam’s mitotypes (Fig. 2). The Gould’s populations          II) of the control region. The neighbour-joining tree based
were fixed for a single mitotype, with the exception of            on differences among individuals (Fig. 3) followed the
a closely related mitotype found in a single individual.           same general pattern seen in the haplotype tree (Fig. 2),
One of the mutations found uniquely in Gould’s mitotypes           suggesting that the Gould’s subspecies was the most
and in one Florida mitotype (represented by a single indi-         divergent, followed by the Merriam’s and Rio Grande
vidual) was located in the central conserved region (domain        subspecies.

                                                                        © 2002 Blackwell Science Ltd, Molecular Ecology, 11, 643–657
R A N G E W I D E G E N E T I C A N A L Y S I S O F W I L D T U R K E Y 649

                                                                                           Fig. 2 Neighbour-joining dendrogram of
                                                                                           wild turkey mitotypes based on control
                                                                                           region sequence data. Mitotypes are desig-
                                                                                           nated by letter, number of individuals
                                                                                           represented, and subspecies: eastern sub-
                                                                                           species (E), Florida subspecies (F), Rio
                                                                                           Grande subspecies (R), Merriam’s subspecies
                                                                                           (M), Gould’s subspecies (G). Numbers
                                                                                           along the right margin designate mitotype
                                                                                           clusters used for calculation of F-statistics.

   Eight mitotype clusters were assigned, based on the
                                                                      Microsatellite analysis
neighbour-joining mitotype tree (Fig. 2), excluding the
ocellated turkey samples, in order to estimate FST using θ.           Microsatellite markers provide multiallelic, co-dominant
A very high degree of mitotype structuring among subspe-              genetic data to contrast AFLP analysis and control region
cies was detected (ΦST = 0.613, θ = 0.546 (P (both) < 0.0001).        sequencing. Amplification of microsatellite loci was suc-
Pairwise θ-values among subspecies (Table 4) suggested                cessful on all but 28 of the 1655 total (individual by locus)
that the eastern and Florida subspecies were the least                reactions. The number of alleles detected per locus was
distinct, and the θ calculated for this pair of subspecies was        highly variable: TUM6 (two alleles, 145 –147 bp), TUM12 (12
the only nonsignificant comparison (P = 0.009) using the              alleles, 191–223 bp), TUM17 (14 alleles, 161–189 bp),
Bonferroni-adjusted significance level of 0.005.                      TUM23 (12 alleles, 144–166 bp), and TUM50 (38 alleles,
   Mitotype diversity (h) and nucleotide diversity (π) were           113–160 bp). Genotypic frequencies were significantly
similar among subspecies with the exception of the Gould’s            different (P < 0.05) from Hardy–Weinberg expectations in
subspecies, which was less diverse by an order of magni-              eight of the 105, or 7.6%, of the population by locus data
tude according to both measures (Table 5). The remaining              sets for which there was more than one segregating allele.
subspecies were characterized by high h and low π. The                The deviations were found in the following populations
eastern and Rio Grande subspecies showed the greatest                 (and loci): FBC (TUM12), RDW (TUM50), RKC (TUM12),
diversity according to both measures.                                 RKW (TUM50), EOM (TUM 12), MWM (TUM17), EWV

© 2002 Blackwell Science Ltd, Molecular Ecology, 11, 643–657
650 K . E . M O C K E T A L .

Table 4 Pairwise θ-values among subspecies of wild turkey using mitochondrial sequences (above diagonal), AFLP data (above diagonal,
italics), and microsatellite data (below diagonal)

                             Eastern                  Florida           Gould’s                Merriam’s                  Rio Grande

Eastern                      —                        0.120*            0.687                  0.679                      0.252
                                                      0.035             0.320                  0.176                      0.106
Florida                      0.003a                   —                 0.654                  0.658                      0.178
                                                                        0.336                  0.181                      0.126
Gould’s                      0.010                    0.010             —                      0.888                      0.554
                                                                                               0.287                      0.255
Merriam’s                    0.010                    0.010             0.014                  —                          0.559
                                                                                                                          0.151
Rio Grande                   0.003                    0.003             0.009                  0.008                      —

*not significant (P ≥ 0.005, with Bonferroni correction).

                                                                     Table 5 Haplotype (h) and nucleotide (π) diversities (Nei 1987)
                                                                     for wild turkey subspecies based on mitochondrial control region
                                                                     sequencing

                                                                     Subspecies              h (SD)                   π (SD)

                                                                     Eastern                 0.895 (0.03)             0.00451 (0.0004)
                                                                     Florida                 0.813 (0.05)             0.00402 (0.0005)
                                                                     Rio Grande              0.868 (0.02)             0.00547 (0.0003)
                                                                     Merriam’s               0.643 (0.06)             0.00378 (0.0008)
                                                                     Gould’s                 0.080 (0.07)             0.00018 (0.0002)

                                                                     level (θ = 0.173, SD = 0.05) than at the subspecies level
                                                                     (θ = 0.113, SD = 0.03), and none of the 95% confidence
                                                                     intervals for these values included zero (Fig. 5).
                                                                        Values of θ for pairwise subspecies (Table 4) suggested
                                                                     that the least structuring was between eastern and Florida,
                                                                     eastern and Rio Grande, and Rio Grande and Florida
Fig. 3. Neighbour-joining dendrogram of wild turkey popu-
                                                                     subspecies, while the greatest degree of structuring was
lations based on a matrix of the average proportion of control
region nucleotide differences. Population codes are described in
                                                                     between the Merriam’s and Gould’s subspecies. All
Table 1.                                                             pairwise θ-values were significant (P < 0.005, with a
                                                                     Bonferroni correction for pairwise comparisons) except for
                                                                     the eastern and Florida subspecies (P = 0.0185). Values
(TUM 12), GYS (TUM 17). Thus, there was no apparent                  of θ for populations within subspecies suggested that the
concentration of these deviations within a particular                Merriam’s populations were the most highly structured,
population, subspecies, or locus.                                    followed by Rio Grande populations (Fig. 5). There was
   upgma cluster analysis of populations (Fig. 4a) was               a negative correlation (r = 0.81) between the number of
consistent with current subspecific designations with the            alleles at a locus and the θ-value calculated for that locus.
exception of the eastern and Florida subspecies, which               This correlation was nonsignificant (P = 0.10) with only
formed a single cluster. Bootstrap support for the major             five loci.
cluster topology, however, was weak. Average genetic dis-               According to the analysis of paired, microsatellite
tances between pairs of populations within subspecies                allele-specific differences in D, the eastern subspecies was
were consistently and significantly less than distances              significantly more diverse than any of the other species,
among subspecies except the eastern and Florida sub-                 and the Rio Grande subspecies was more diverse than
species (Table 6). The average genetic distance between              either the Gould’s or Merriam’s subspecies. Other differ-
eastern and Florida populations was within a standard error          ences in D among pairs of subspecies were not significant.
of the average genetic distance between eastern popula-              The total number of microsatellite alleles found across
tions. Genetic structuring was stronger at the population            all five loci were as follows: Merriam’s (22), Gould’s (24),

                                                                          © 2002 Blackwell Science Ltd, Molecular Ecology, 11, 643–657
R A N G E W I D E G E N E T I C A N A L Y S I S O F W I L D T U R K E Y 651

                                                                               CS                Fig. 4 upgma cluster analysis dendro-
                                                                               SP
                                                                               SM    Merriam's   grams based on Nei’s (1978) distance
                                                                               WM                calculated from (a) five microsatellite loci
                    0.44                                                       SL
       a.                                                                      NL
                                                                                                 and (b) 83 AFLP loci in wild turkey
                                                                               EN                populations representing five subspecies.
                                                                               KC    Rio         Numbers at interior nodes represent the
             0.54                                                              GH    Grande
                                                                               KW
                                                                                                 proportion of 1000 bootstrap replicates that
                                                                               TC                clustered the same taxa.
                                                                               CS
                                                                               YS    Gould's
                                                                               NS
                                                                               SW
                                                                               OM
                                                                               WV    Eastern/
                                                                               AA    Florida
                                                                               TL
                                     0.95                                      CL
                                                                               BC
                                                                               WW

                                                                               BW
                                                                               SW
                                                                               WV
                                                                               AA    Eastern/
                                                                               WW    Florida
                                                        1.0                    TL
                                                                               OM
                                                                               BC
                                            0.91
        b.                                                                     CL
                                                                               NL
                                                                               EN
                                                                               KC    Rio
                              1.0                                              DW    Grande
                                                                               KW
                                                                               TC
                                                                               GH
                                                                               WM
                                                                               SL
                                                                               MS    Merriam's
                                                                               SP
                                                                               SM
                                                                               YS
                                                                               GC    Gould's
                                                                               NS

0.15                       0.10                    0.05                    0

                Nei’s (1978) Genetic Distance

Table 6 Matrix of average pairwise Nei’s (1978) unbiased genetic distances (± SE) within and among subspecies using AFLP (A, above the
diagonal) and microsatellite data (M, below the diagonal). Intrasubspecific contrasts are italicized

                    Eastern                   Florida                   Rio Grande               Merriam’s                 Gould’s

Eastern             0.0312 (A) (0.003)        0.0311 (0.002)           0.0644 (0.003)            0.0943 (0.002)            0.1451 (0.004)
                    0.1269 (M) (0.027)
Florida             0.1710 (0.019)            0.0263 (A) (0.004)       0.0638 (0.004)            0.0885 (0.003)            0.1425 (0.004)
                                              0.1049 (M) (0.025)
Rio Grande          0.3490 (0.038)            0.4929 (0.044)           0.0356 (A) (0.003)        0.0900 (0.003)            0.1209 (0.005)
                                                                       0.1362 (M) (0.022)
Merriam’s           0.6255 (0.058)            0.8119 (0.048)           0.2780 (0.020)            0.0537 (A) (0.006)        0.1318 (0.005)
                                                                                                 0.1590 (M) (0.026)
Gould’s             0.4409 (0.065)            0.4409 (0.065)           0.3265 (0.022)            0.3367 (0.027)            0.0197 (A) (0.002)
                                                                                                                           0.0344 (M) (0.017)

Florida (31), Rio Grande (32), and eastern (34). The Florida              eastern (P = 0.109), or Gould’s (P = 0.406) subspecies. None
subspecies did show evidence of a recent bottleneck                       of the subspecies showed a deviation from the l-shaped
according to the one-tailed Wilcoxon test for gene diversity              distribution of allele frequencies expected for stable pop-
excess (P = 0.03125). The results of this test were not signi-            ulations (Luikart et al. 1998). Of the three subspecies tested
ficant for the Merriam’s (P = 0.969), Rio Grande (P = 0.500),             for a pattern of isolation by distance using microsatellite

© 2002 Blackwell Science Ltd, Molecular Ecology, 11, 643–657
652 K . E . M O C K E T A L .

                                                                                      AFLP analysis
                                                                                      AFLP analysis yielded 83 polymorphic loci that could
                                                                                      be scored for all samples. The technique error rate was
                                                                                      estimated at 2.5%, which is comparable to the error
                                                                                      rates found in other AFLP studies on natural populations
                                                                                      (Busch et al. 2000). Genetic clustering (Fig. 4b) followed
                                                                                      existing subspecific boundaries, with the exception
                                                                                      of the eastern and Florida subspecies, supporting the
                                                                                      microsatellite results (Fig. 4a). Bootstrap support for the
                                                                                      major cluster topology was greater than 90%. Consistent
                                                                                      with the microsatellite results, average genetic distances
                                                                                      between pairs of populations within subspecies were
                                                                                      significantly less than distances among subspecies with
Fig. 5 Values of θ and 95% confidence intervals for AFLP and                          the exception of the eastern and Florida subspecies
microsatellite data among subspecies, all populations, and popu-                      (Table 6).
lations within subspecies.                                                               As with microsatellite data, genetic structuring with
                                                                                      AFLP data was found to be greater at the population level
data, only the Merriam’s subspecies showed a significant                              (θ = 0.294, SD = 0.02) than at the subspecies level (θ = 0.175,
correlation (r = 0.656) between the pairwise matrices of θ                            SD = 0.02), and at neither level did the 95% confid-
and geographical distance with Mantel testing (P = 0.043)                             ence intervals of θ include zero. Within subspecies, the
(Fig. 6).                                                                             Merriam’s populations showed the highest levels of genetic
                                                                                      structuring (θ) (Fig. 5). AFLP data yielded higher θ-values

                                  AFLP data:                           Microsatellite data:
                                                                                                 Fig. 6 Pairwise population comparisons of theta (θ)
                                 M. g. merriami                          M. g. merriami          versus geographical distance in three subspecies of
        0.30                        r = 0.856               0.30
                                                                       r = 0.656 p = 0.043       wild turkey using AFLP and microsatellite data.
        0.25                        p = 0.012               0.25                                 Values of r and P provided in each graph were
        0.20                                                0.20                                 calculated from a Mantel test comparing matrices of θ
Theta

                                                    Theta

        0.15                                                0.15                                 and geographical distance.
        0.10                                                0.10
        0.05                                                0.05
        0.00                                                0.00
               0       500        1000    1500                     0   500     1000       1500
                        Kilometres                                      Kilometres

                        AFLP data:
                                                                        Microsatellite data:
                      M. g. silvestris
        0.30                                                              M. g. silvestris
                   r = 0.165 p = 0.233                      0.30
        0.25                                                           r = –0.485 p = 0.074
                                                            0.25
        0.20                                                0.20
                                                    Theta
Theta

        0.15                                                0.15
        0.10                                                0.10
        0.05                                                0.05
        0.00                                                0.00
               0        500       1000     1500                    0   500     1000      1500
                         Kilometres                                    Kilometres

                                   AFLP data:
                                M . g. intermedia                        Microsatellite data:
        0.30                  r = 0.343 p = 0.183           0.30           M. g. intermedia
        0.25                                                0.25         r = 0.295 p = 0.217
        0.20                                                0.20
Theta

                                                    Theta

        0.15                                                0.15
        0.10                                                0.10
        0.05                                                0.05
        0.00                                                0.00
               0        500        1000    1500        –0.05 0         500     1000       1500
                         Kilometres                                     Kilometres

                                                                                           © 2002 Blackwell Science Ltd, Molecular Ecology, 11, 643–657
R A N G E W I D E G E N E T I C A N A L Y S I S O F W I L D T U R K E Y 653

Table 7 Allele-specific differences in D between all pairs of subspecies expressed as 95% confidence intervals for AFLP (above diagonal)
and microsatellite (below diagonal) data

               Eastern                  Florida                  Rio Grande               Merriam’s                 Gould’s

Eastern        P (AFLP) = 0.50 – 0.70   0.008–0.034              –0.049–0.011             –0.051–0.028              – 0.039 – 0.054
Florida        0.006 – 0.133            P (AFLP) = 0.39–0.61     –0.062–0.001             –0.021–0.065              – 0.045 – 0.050
Rio Grande     0.020 – 0.060            –0.108–0.052             P (AFLP) = 0.37–0.58     –0.042–0.031              – 0.071– 0.018
Merriam’s      0.076 – 0.287            –0.255–0.003             –0.254 to –0.023         P (AFLP) = 0.46–0.67      – 0.066 – 0.024
Gould’s        0.045 – 0.344            –0.312–0.073             –0.308 to –0.001         –0.284–0.248              P (AFLP) = 0.54 – 0.73

Confidence intervals in bold did not include zero. Per cent polymorphic loci (P) for each subspecies, also expressed as 95% confidence
intervals, are provided along the diagonal.

than microsatellite data at both the species and subspecies             may also have obscured historical differences among these
levels (Fig. 5). The eastern subspecies had a significantly             two groups, but our sample populations were chosen
higher value of D than the Florida subspecies, but all other            specifically to minimize this possibility. The Rio Grande
pairwise differences in D among subspecies were non-                    subspecies historically occupied habitat continuous with
significant (Table 7). The 95% confidence intervals for P               that of the eastern/Florida subspecies as well (Schorger
were overlapping for all subspecies.                                    1966; Aldrich 1967). It is possible that these subspecies may
   As with the microsatellite data, only the Merriam’s sub-             now appear to be genetically distinct only because
species showed a significant correlation (r = 0.856) between            intermediate populations occupying habitat near the
pairwise matrices of θ and geographical distance with                   historical range boundaries were extirpated in the early
Mantel testing (P = 0.012) (Fig. 6).                                    1900s. However, there was no indication of an east–west
                                                                        cline in genetic differences across eastern populations, as
                                                                        might be expected in such a situation.
Discussion
                                                                           Genetic differentiation of the Merriam’s and Gould’s
                                                                        subspecies is most likely the result of their relatively long
Genetic differentiation and subspecific designation
                                                                        geographical isolation from other subspecies by unsuitable
Our data generally support current subspecies designations              desert habitats. Lack of palaeontological evidence of tur-
for wild turkey, with the exception of the eastern and Florida          keys in the current range of the Merriam’s subspecies has
subspecies, which together form a genetically distinct group.           led to the hypothesis that this subspecies was introduced
The geographical differentiation of turkey populations                  into its current range less than 1500 years ago by Pueblo
along subspecies lines is consistent with the geographical              Indian cultures (Hargrave 1970; Rea 1980; McKusick 1986;
potential for gene flow and isolation that has historically             Breitburg 1988). According to these hypotheses, Merriam’s
existed between current subspecies ranges. Continuous                   turkey was derived from either eastern or Gould’s popu-
habitat has linked populations of eastern and Florida                   lations. Our data do not support a strong link between
wild turkeys both currently and historically (Schorger                  Merriam’s and either of these two groups. An alternative
1966; Aldrich 1967), and gene flow between the two has                  hypothesis (Shaw & Mollohan 1992) argues that Merriam’s
apparently been great enough to prevent major genetic                   turkey was isolated from Rio Grande and/or Gould’s tur-
differentiation detectable with neutral markers. Sub-                   keys when suitable woodland habitat contracted and was
specific plumage characteristics are intermediate in                    replaced by desert habitats at the end of the Pleistocene and
turkeys from the areas where the ranges of these two                    early Holocene. The mitochondrial data presented here
putative subspecies meet in the southeastern United States              suggests that the Merriam’s subspecies has been more
(Aldrich 1967), a finding consistent with the hypothesis                recently associated with the Rio Grande subspecies than
of significant gene flow between these two areas. In north-             with the Gould’s subspecies.
ern Florida and southern Georgia, Remington (1968)                         Although both nuclear techniques supported the same
described a ‘suture zone’ of putative secondary contact in              subspecific groupings, they differed with respect to rela-
a variety of terrestrial taxa between endemic forms in                  tionships among the subspecies. The pattern of clustering
Florida and continental forms. We found no evidence                     in the mitochondrial data (Figs 2 and 3) resembled that found
of endemic forms of wild turkey in Florida, although such               with AFLP data, suggesting that the Gould’s subspecies
a pattern could have been eliminated by extensive                       was the most divergent, followed by the Merriam’s sub-
historical and present-day gene flow. Undocumented                      species. Given the relatively small number of microsatellite
translocations between eastern and Florida subspecies                   loci and the weak bootstrap support for the microsatellite

© 2002 Blackwell Science Ltd, Molecular Ecology, 11, 643–657
654 K . E . M O C K E T A L .

groupings, the relationships suggested by AFLP analysis          combination with the cluster analysis results, suggests
appear the more robust of the two. The relationships             that the currently designated subspecies do reflect groups
suggested by the microsatellite analysis, with the eastern and   of populations that share a long evolutionary history, with
Florida subspecies being the most divergent, would also be       the exception of the eastern and Florida subspecies. Values
difficult to explain based on our understanding of historical    of θ estimated using AFLPs were greater than those
habitat connectivity. The development of additional micro-       estimated using microsatellite data both within and among
satellite loci for use in wild turkeys would allow a more        subspecies (Fig. 5). This may be an artefact of the high
direct comparison of these techniques. One limitation            level of polymorphism in microsatellite loci (Hedrick 1999;
of AFLP data is the need to assume Hardy–Weinberg equi-          Balloux et al. 2000), a conclusion supported by a nega-
librium in order to estimate allele frequencies. Because         tive correlation between the number of microsatellite
we also used microsatellites to characterize the same            alleles at a locus and the locus-specific value of θ. The
sample set, we were able to assess the validity of this          comparative magnitude of θ within subspecies suggests
assumption, at least with respect to the microsatellite loci     that there is greater genetic differentiation among the
analysed. Our results suggest that the number of popula-         Merriam’s and Rio Grande populations than among
tion by locus data sets that were significantly (P < 0.05)       populations within the other subspecies. This may reflect
different from Hardy–Weinberg expectations (7.6%) was            the less continuous nature of the habitat historically
only slightly greater than what would be expected by             occupied by these subspecies.
chance alone (5%). Therefore, the assumption of Hardy–
Weinberg equilibrium in our sample populations seems
                                                                 Geographic versus genetic distance among subspecies
reasonable.
                                                                 In the absence of human intervention, dispersal in wild
                                                                 turkeys is most likely by juvenile (predominantly female)
Genetic diversity within subspecies
                                                                 birds moving out of the home range of their natal flock into
While population-level genetic diversity measures                adjacent areas over relatively small geographical distances
suggested that no one subspecies was consistently more           (Ellis & Lewis 1967; Eaton et al. 1976; Exum et al. 1985). As
diverse than the others (Tables 4 and 6), the eastern            a result, wild turkey populations may correspond
subspecies tended to be among the most diverse and the           relatively well to predictions based on two-dimensional
Gould’s subspecies tended to be the least diverse,               stepping-stone models of isolation by distance (Kimura
particularly with respect to mitochondrial diversity. The        1953; Malècot 1955; Kimura & Weiss 1964). These models
lack of mitochondrial diversity in Gould’s turkeys could be      predict a positive relationship between geographical
due to a population bottleneck (Grant & Bowen 1998), but         and genetic distance in populations approximating
the approach of Luikart et al. (1998) for detecting recent       demographic equilibrium (Malecot 1955; Slatkin 1993;
bottlenecks based on relative rates of heterozygosity and        Rousset 1997; Hutchison & Templeton 1999). The absence
allele number losses failed to provide evidence of such a        of a strong isolation by distance pattern may have a variety
process in the Gould’s subspecies. This lack of diversity        of interpretations (Rousset 1997; Hutchison & Templeton
could also be due to a persistently low population size in       1999).
this subspecies. Unfortunately, information on population           The eastern wild turkey and Rio Grande populations we
trends in this subspecies is not available.                      analysed did not show significant isolation by distance
   The remaining subspecies showed a general pattern of          effects, and both showed less structuring among popula-
high mitotype diversity and low nucleotide diversity among       tions than the Merriam’s populations (Figs 5 and 6). The
mitotypes. Grant & Bowen (1998) suggest that such a pat-         Rio Grande pattern suggests some effect of distance on
tern could be attributed to a recent expansion from a period     proximal populations, although the relationship is not sig-
of low population sizes, where the low sequence diversity        nificant. It is possible that a pattern of isolation by distance
among mitotypes is due to a recent coalescence, and the          would fail to be detected in these subspecies if distances
high mitotype diversity is due to the retention of mutations     between sampled populations were too large (Rousset 1997).
in an expanding population. In wild turkeys, this may be a       The eastern and Rio Grande subspecies were sampled over
reflection of rapid expansion following the retreat of glacial   somewhat greater geographical distances than was the
maxima at the end of the Pleistocene.                            Merriam’s subspecies. However, even at distances of under
                                                                 800 km, the pattern of isolation by distance was more
                                                                 apparent among Merriam’s populations than among east-
Hierarchical genetic structuring
                                                                 ern or Rio Grande populations, and the values of θ among
Genetic structuring (θ) across the species complex was           pairwise populations in both the Rio Grande and eastern
evident at both the population and subspecies levels             subspecies tended to be lower than those among Merriam’s
(Fig. 5). The magnitude of θ at the subspecies level, in         populations. The apparent absence of a significant isolation

                                                                      © 2002 Blackwell Science Ltd, Molecular Ecology, 11, 643–657
R A N G E W I D E G E N E T I C A N A L Y S I S O F W I L D T U R K E Y 655

by distance pattern among the Rio Grande and eastern
                                                                      Management implications
populations could also be interpreted as the result of post-
Pleistocene colonization into a relatively continuous habi-           Based on extant populations that best represent the
tat in these subspecies. High levels of gene flow among               historical pattern of genetic differentiation, our analyses
populations could result in a weaker relationship between             support current subspecies designations, except for the
genetic and geographical distance relative to the Merriam’s           eastern and Florida subspecies. These two subspecies
subspecies. This interpretation is consistent with our                appear to be a single unit genetically. The remaining
understanding of subspecies-specific differences in histor-           subspecies appear genetically distinct and may exhibit
ical habitat continuity: the eastern and Rio Grande subspe-           different demographic structures. Therefore, managers
cies occupy habitat that is far more continuous than that of          should avoid translocations that would threaten currently
the Merriam’s subspecies. It is also possible that this pattern       recognized subspecies population integrity.
could reflect the influence of widespread reintroduction                 Here we have used analyses of putatively neutral
programmes during the last century, producing a pattern               markers to delineate groups of populations that share a
consistent with recent range expansion from a common                  common evolutionary history. However, it is possible that
source population (Hutchison & Templeton 1999). These                 important adaptive traits will not follow patterns in neutral
reintroduction programmes were particularly prevalent in              variation (Endler 1986; Knapp & Rice 1998; Crandall et al.
the eastern subspecies but also occurred in the Rio Grande            2000). Adaptive variation may develop despite high levels
subspecies. However, Leberg et al. (1994) have demon-                 of gene flow, or selective pressures may prevent adaptive
strated that the genetic effects of re-introductions on neigh-        divergence despite neutral divergence. In general, we are
bouring populations may be relatively slow to develop.                lacking data on heritable, adaptive variation in wild turkeys.
Additionally, our study focused on those populations with             In order to address adaptive variation directly, managers
the best record of having remained historically strong and            should maintain records of translocation outcomes and
which tended to serve as source populations for reintro-              attempt to correlate these with regional ecological data.
duction programmes.                                                   Until data on the ecological equivalency of subspecies is
   In contrast to eastern and Rio Grande populations,                 available, conservative management should focus at the
pairwise θ-values among pairs of Merriam’s popula-                    level of regional populations while respecting subspecies
tions showed a significantly positive relationship with               boundaries.
geographical distance with both nuclear marker systems                   The Gould’s subspecies appears to be the most divergent
(Fig. 6). This pattern is consistent with expectations for            of the five subspecies, but is the least studied in terms of
populations that have experienced restricted geographical             habitat requirements and availability, demographic history
dispersal for long enough to have approached regional                 and current status. Addressing these questions should become
demographic equilibrium. Because suitable habitat for                 a high priority for managers concerned with the conserva-
Merriam’s turkey often forms an archipelago of high-                  tion of species-wide genetic diversity in wild turkeys.
elevation habitat patches separated by unsuitable desert
environments, Merriam’s populations are likely to exper-
ience lower levels of interpopulational gene flow than                Acknowledgements
eastern and Rio Grande populations, resulting in a more               This study was supported by the National Wild Turkey Federation
strongly positive relationship between geographical dis-              and the Arizona Game and Fish Department Heritage Fund. We
tance and genetic distance (Rousset 1997; Hutchison &                 are grateful to the following for sample collection assistance: Arizona
Templeton 1999). However, further reduction in the                    Game and Fish Department (B. F. Wakeling, R. Engel-Wilson),
limited habitat connectivity that exists among Merriam’s              Colorado Department of Natural Resources, Division of Wildlife
populations or an increase in translocations could alter              (R. W. Hoffman), Texas Parks and Wildlife Department (M. J. Peterson,
                                                                      J. R. Fugate, M. D. Hobson, W. E. Armstrong, J. P. Hughes, W. B. Russ),
the relative effects of genetic drift or gene flow, resulting in
                                                                      Alabama Game and Fish Division (S. W. Barnett), West Virginia
a gradual loss of this isolation by distance pattern in the           Division of Natural Resources (W. A. Lesser, C. I. Taylor), South
future (Leberg 1991; Waples 1998; Hutchison & Templeton               Carolina Department of Natural Resources (D. P. Baumann), Camp
1999).                                                                Lejeune Fish and Wildlife Division (K. A. Lombardo), Avon Park
   Given the many assumptions underlying isolation by                 Air Force Range (P. B. Walsh, J. M. Lee), Florida Game and Fresh-
distance models and the multitude of factors that can affect          water Fish Commission (L. S. Perrin, H. G. Steelman, S. L. Glass), US
population structure, hypotheses like those outlined above            Fish and Wildlife Service National Forensics Laboratory (S. R. Fain),
                                                                      Real Turkeys (L. E. Williams, Jr.), Missouri Department of Con-
must remain tentative (Slatkin 1993). Nevertheless, these
                                                                      servation (L. D. VanGilder, P. C. Freeman, D. A. Hasenbeck), the
analyses indicate that the demographic factors that have              United States Embassy in Mexico City (A. Narvaez), S. D. Schemnitz,
resulted in the current population structure have been                R. C. Dujay, G. A. Wright, R. H. Crawford, and A. M. Sada. We
different for the Merriam’s versus the Rio Grande and                 thank Christy J. W. Watson, Emily K. Latch, Baoshan Shen and
eastern populations.                                                  Christen L. Williams for their assistance with the laboratory portion

© 2002 Blackwell Science Ltd, Molecular Ecology, 11, 643–657
656 K . E . M O C K E T A L .

of this research. We also acknowledge H. G. Shaw for his con-          Grant WS, Bowen BW (1998) Shallow population histories in deep
tinuous inspiration and encouragement, and Joseph Busch for              evolutionary lineages of marine fishes: insights from sardines
his analytical advice.                                                   and anchovies and lessons for conservation. Journal of Heredity,
                                                                         89, 415–425.
                                                                       Guo SW, Thompson EA (1992) Performing the exact test of
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