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Glycans as Biomarkers in Prostate Cancer - MDPI
International Journal of
           Molecular Sciences

Review
Glycans as Biomarkers in Prostate Cancer
Emma Scott and Jennifer Munkley *
 Institute of Genetic Medicine, Newcastle University, Newcastle upon Tyne NE1 3BZ, UK;
 Emma.Scott@newcastle.ac.uk
 * Correspondence: Jennifer.munkley@ncl.ac.uk
                                                                                                  
 Received: 21 February 2019; Accepted: 17 March 2019; Published: 19 March 2019                    

 Abstract: Prostate cancer is the most commonly diagnosed malignancy in men, claiming over
 350,000 lives worldwide annually. Current diagnosis relies on prostate-specific antigen (PSA) testing,
 but this misses some aggressive tumours, and leads to the overtreatment of non-harmful disease.
 Hence, there is an urgent unmet clinical need to identify new diagnostic and prognostic biomarkers.
 As prostate cancer is a heterogeneous and multifocal disease, it is likely that multiple biomarkers
 will be needed to guide clinical decisions. Fluid-based biomarkers would be ideal, and attention is
 now turning to minimally invasive liquid biopsies, which enable the analysis of tumour components
 in patient blood or urine. Effective diagnostics using liquid biopsies will require a multifaceted
 approach, and a recent high-profile review discussed combining multiple analytes, including changes
 to the tumour transcriptome, epigenome, proteome, and metabolome. However, the concentration on
 genomics-based paramaters for analysing liquid biopsies is potentially missing a goldmine. Glycans
 have shown huge promise as disease biomarkers, and data suggests that integrating biomarkers
 across multi-omic platforms (including changes to the glycome) can improve the stratification of
 patients with prostate cancer. A wide range of alterations to glycans have been observed in prostate
 cancer, including changes to PSA glycosylation, increased sialylation and core fucosylation, increased
 O-GlcNacylation, the emergence of cryptic and branched N-glyans, and changes to galectins and
 proteoglycans. In this review, we discuss the huge potential to exploit glycans as diagnostic and
 prognostic biomarkers for prostate cancer, and argue that the inclusion of glycans in a multi-analyte
 liquid biopsy test for prostate cancer will help maximise clinical utility.

 Keywords: prostate cancer; biomarkers; liquid biopsy; glycans; glycosylation

1. Introduction
     Prostate cancer is the most common cancer in men, and is a major clinical burden [1]. In the last
decade, research into prostate cancer has advanced rapidly, and large advances have been made in both
finding new treatments and understanding the underlying biology. However, several areas of urgent
unmet clinical need remain, including the identification of: (i) validated biomarkers to complement
prostate-specific antigen (PSA) for screening; (ii) prognostic biomarkers with the clinical utility to
distinguish indolent and aggressive disease; (iii) molecular stratification methods and predictive
biomarkers; and (iv) surrogate end point biomarkers that are valid measures of therapeutic response
and survival [2]. As prostate cancer is a heterogeneous and multifocal disease, it is likely that multiple
biomarkers will be needed to guide clinical decisions. Fluid-based biomarkers would be ideal, and
attention is now turning to minimally invasive liquid biopsies, which enable the analysis of tumour
components in patient biological fluids such as blood and urine. Urine is an amenable bodily fluid
for prostate cancer biomarker discovery. It is easily obtained in a non-invasive way, and due to the
proximity of the prostate to the bladder, urine may carry markers that reflect the development and
progression of prostate cancer [3]. Proximal fluids of the prostate such as expressed prostatic secretions

Int. J. Mol. Sci. 2019, 20, 1389; doi:10.3390/ijms20061389                       www.mdpi.com/journal/ijms
Glycans as Biomarkers in Prostate Cancer - MDPI
Int. J. Mol. Sci. 2019, 20, 1389                                                                                                              2 of 20

(fluid secreted by the prostate after a digital rectal prostate massage) can also be collected in urine and
used as a source of biomarkers [4]. Whereas traditional tissue biopsies only provide limited snapshots
of the
     of tumour      andsuch
         the prostate       might      fail to reflect
                                  as expressed              heterogeneity,
                                                      prostatic    secretions (fluidliquidsecreted
                                                                                             biopsies  by can  provideafter
                                                                                                           the prostate       a comprehensive
                                                                                                                                    a digital
     of the prostate such as expressed prostatic secretions (fluid secreted by the prostate after a digital
viewrectal
      of allprostate
               cancerous  massage)
                                lesions   can  also be collected
                                            (primary                      in urine as
                                                            and metastases)            and
                                                                                         wellusedasas    a source
                                                                                                      offering    theofopportunity
                                                                                                                          biomarkers [4].   to track
     rectal prostate massage) can also be collected in urine and used as a source of biomarkers [4].
     Whereas
tumour            traditional
           evolution     [5].     tissue biopsies only provide limited snapshots of the tumour and might fail to
     Whereas traditional tissue biopsies only provide limited snapshots of the tumour and might fail to
     reflect
      A 2018heterogeneity,
                high-profile review liquid biopsies
                                                in Nature   canGenetics
                                                                  provide a comprehensive              view of all     cancerous usinglesions
     reflect   heterogeneity,       liquid biopsies         can providehighlighted
                                                                               a comprehensive that effective
                                                                                                       view of all diagnostics
                                                                                                                       cancerous lesionsliquid
     (primary and metastases) as well as offering the opportunity to track tumour evolution [5].
biopsies
     (primarywilland
                   require      the multiparametric
                        metastases)       as well as offeringanalysis             of several
                                                                    the opportunity              analytes
                                                                                           to track   tumour(including
                                                                                                               evolution [5].    changes to the
            A 2018 high-profile review in Nature Genetics highlighted that effective diagnostics using liquid
transcriptome,
            A 2018epigenome,
                      high-profile proteome,
                                        review in Nature and the     metabolome)
                                                                 Genetics   highlighted  within     the same
                                                                                             that effective      blood or using
                                                                                                              diagnostics       urine liquid
                                                                                                                                        sample [6].
     biopsies will require the multiparametric analysis of several analytes (including changes to the
     biopsies will
The detection      of   require the
                       changes       to    multiparametric
                                         the  glycome,        and  analysis
                                                                     more        of several cancer-associated
                                                                              specifically     analytes (includingglycan   changes     to the
                                                                                                                                    sugar    groups,
     transcriptome, epigenome, proteome, and the metabolome) within the same blood or urine sample
     transcriptome,
was [6].
     not Theincluded      epigenome,
                          in  this          proteome,
                                      review.       Glycans and have
                                                                  the metabolome)
                                                                          shown       hugewithin    the same
                                                                                               promise     as   blood or urine
                                                                                                               diagnostic             sample for
                                                                                                                                 biomarkers
                detection of changes to the glycome, and more specifically cancer-associated glycan sugar
     [6].[7–9],
cancer     The detection
                  and recent   of changes      to the glycome,
                                   data suggests                      and more        specificallyacross
                                                                                                     cancer-associated        glycan sugar
     groups,     was    not included         in this that       integrating
                                                          review.     Glycansbiomarkers
                                                                                     have shown        hugemulti-omic
                                                                                                              promise asplatformsdiagnostic  (which
     groups, was not included in this review. Glycans have shown huge promise as diagnostic
includes    changes
     biomarkers      forto   the glycome)
                          cancer    [7–9], andcan        improve
                                                    recent             the stratification
                                                              data suggests                     of patients
                                                                                  that integrating              withacross
                                                                                                       biomarkers        prostate     cancer [10].
                                                                                                                                 multi-omic
     biomarkers for cancer [7–9], and recent data suggests that integrating biomarkers across multi-omic
     platforms
      Glycans are  (which     includes changes
                        saccharides         that cantobethe       glycome)
                                                               attached      tocan    improve
                                                                                  proteins,       the stratification
                                                                                               lipids,                   of patients
                                                                                                         and other glycans               with the
                                                                                                                                      through
     platforms (which includes changes to the glycome) can improve the stratification of patients with
     prostate
enzymatic        cancer   [10].
     prostateprocess        known as glycosylation. Glycosylation is the most common posttranslational
                 cancer [10].
            Glycans
modification,      and areis saccharides
                              now known       thatto can   be attached
                                                      be essential       to to   proteins,every
                                                                             virtually       lipids, and other process
                                                                                                                    glycans through        the [11].
            Glycans are saccharides           that    can   be attached     to   proteins, lipids,biological
                                                                                                      and other glycans through in the bodythe
     enzymatic process known as glycosylation. Glycosylation is the most common posttranslational
Glycans    can either
     enzymatic      processbe added
                                knownsequentially
                                            as glycosylation.  to theGlycosylation
                                                                        hydroxyl oxygen   is the ofmostserine/threonine          residues on the
                                                                                                           common posttranslational
     modification, and is now known to be essential to virtually every biological process in the body
target  protein (O-linked
     modification,      and is now  glycosylation),
                                           known to beor          as pre-assembled
                                                               essential    to virtually blocks        of 14 sugars
                                                                                             every biological             thatinare
                                                                                                                    process        thetransferred
                                                                                                                                        body
     [11]. Glycans can either be added sequentially to the hydroxyl oxygen of serine/threonine residues
     [11]. Glycans can
co-translationally            either    be  added     sequentially      to the hydroxyl        oxygen    ofthe
                                                                                                            serine/threonine        residues
     on the target protein (O-linked glycosylation), or as pre-assembled blocks of 14 sugars that(N-linked
                          via    the    amide       group      of  an   asparagine        residue      on        target      protein       are
     on the target
glycosylation).      How protein
                              much   (O-linked
                                        a protein    glycosylation),
                                                        or amide
                                                            lipid isgroup  or as pre-assembled
                                                                       glycosylated                     blocks
                                                                                                        on theof
                                                                                           dependsresidue             14 sugars
                                                                                                                  number             that are
                                                                                                                                of glycosylation
     transferred co-translationally            via the                          of an asparagine                 on    the target     protein
     transferred
sites(N-linked
      present, and   co-translationally
                          the expression       viaofthe     amide glycosylation
                                                        specific     group of an asparagine
                                                                                         enzymesresidue within   on
                                                                                                                  theonthe
                                                                                                                         celltarget protein
                   glycosylation).        How much          a protein    or lipid is glycosylated         depends           the[9].   Glycans
                                                                                                                                 number      of are
     (N-linked glycosylation). How much a protein or lipid is glycosylated depends on the number of
major  building blocks
     glycosylation              of life [12],
                        sites present,      and but      have beenof
                                                   the expression        hugely
                                                                            specific understudied
                                                                                       glycosylation (Figure
                                                                                                         enzymes1).       This the
                                                                                                                      within     is partly
                                                                                                                                      cell [9].due to
     glycosylation sites present, and the expression of specific glycosylation enzymes within the cell [9].
theirGlycans
      complexity,are major     building blocks
                        the difficulties               of life [12],
                                                 studying        them,butandhavethatbeen  hugely
                                                                                        there   is nounderstudied       (Figure 1).glycans
                                                                                                        clear link between             This is and
     Glycans are major building blocks of life [12], but have been hugely understudied (Figure 1). This is
DNA. partly   due to their
        However,        this   complexity,
                               is  now           the difficulties
                                            changing,        and      studying
                                                                    the   importancethem, and
                                                                                            of   that there
                                                                                                glycans       is no
                                                                                                            can   be  clear   link between as an
                                                                                                                        conceptualised
     partly due to their complexity, the difficulties studying them, and that there is no clear link between
     glycans
extended         and ofDNA.
             model                 However,
                           the central      dogma   this(Figure
                                                           is now changing,            and theto importance          of is
                                                                                                                         glycans
                                                                                                                             rapidlycan     be
     glycans     and DNA.          However,         this is now2).changing,
                                                                         The technology             study glycans
                                                                                       and the importance            of glycans         advancing,
                                                                                                                                      can   be
     conceptualised as an extended model of the central dogma (Figure 2). The technology to study
and there    is expected
     conceptualised        as to
                               anbe     an explosion
                                    extended        modelof   ofinterest
                                                                  the centralin this   area (Figure
                                                                                   dogma      in the next    10 to
                                                                                                        2). The       15 years, which
                                                                                                                   technology       to study  will be
     glycans is rapidly advancing, and there is expected to be an explosion of interest in this area in the
helped    by projects
     glycans    is rapidly such    as the human
                               advancing,      and there  glycome       project
                                                               is expected         [13].
                                                                                to be  an explosion of interest in this area in the
      next 10 to 15 years, which will be helped by projects such as the human glycome project [13].
      next 10 to 15 years, which will be helped by projects such as the human glycome project [13].

           Figure
       Figure      1. Glycans,
              1. Glycans,      the understudied
                           the understudied      major
                                             major     building
                                                    building     blocks
                                                               blocks  ofof  life.
                                                                          life. TheThe glycoproteomecombines
                                                                                     glycoproteome   combines three
           Figure 1. Glycans, the understudied major building blocks of life. The glycoproteome combines
           three
       highly    highly adaptable
              adaptable           interdependent
                         interdependent          biological
                                          biological        alphabets.
                                                     alphabets.        Created
                                                                  Created   with with BioRender.
                                                                                   BioRender.
           three highly adaptable interdependent biological alphabets. Created with BioRender.

             Figure 2. The importance of glycans can be conceptualised as an extended model of the central
           Figure
       Figure     2. importance
              2. The The importance  of glycans
                                 of glycans can can be conceptualised
                                                be conceptualised     as an
                                                                   as an    extended
                                                                         extended    model
                                                                                  model of of
                                                                                           thethe central
                                                                                               central dogma.
           dogma.  Created with BioRender.
           dogma.  Created with
       Created with BioRender.  BioRender.
                                                                                                           2
                                                                                                                                          2
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     Changes to glycans in cancer cells were first described 50 years ago [14], and confirmed by the
development of antibodies against tumour-specific antigens [15]. Aberrant glycosylation is a universal
feature of cancer cells, and cancer-associated glycans have been detected in virtually every cancer
type [16,17]. Cancer cells have numerous changes to glycans compared to normal tissue, including
changes to sialylation, fucosylation, the truncation of O-glycans, and N-glycan branching (see [18] for
more details). The importance of glycans in cancer is emphasised by the majority of the Food and
Drug Administration (FDA)-approved tumour markers being glycan antigens or glycoproteins [19–21].
Glycans have key roles in fundamental molecular and cell biology processes in cancer biology,
including cell signalling, tumour cell invasion, immune modulation, angiogenesis, interactions with
the cell matrix, and metastasis, which are linked to all of the recognised cancer hallmarks [17]. Glycans
secreted by cancer cells likely represent the altered glycosylation status of cancer cells, and are a largely
untapped resource of cancer biomarkers. There is a huge potential to exploit glycans to improve
early diagnosis, as biomarkers for prognosis and stratification, and as markers of specific therapeutic
targets [7].
     The physiological function of the prostate is to act as a secretory gland, which generates and
secretes glycoproteins such as PSA into seminal fluid. As such, the prostate is a major secretor of
glycans, and there is an unrealised opportunity to detect aberrant glycosylation patterns in serum
and urine, and link this to prostate cancer status [22]. As prostate cancer progresses, the epithelial
glands become smaller and more rounded, potentially having a drastic effect on the normal secretory
pathways where proteins and lipids are glycosylated. Glycans can influence cell survival, proliferation,
and metastasis, and likely play a key role in these processes in prostate cancer [22]. A wide range of
alterations to glycans have been observed in prostate cancer, including changes to PSA glycosylation,
increased sialylation and fucosylation, increased O-GlcNacylation, the emergence of cryptic and
branched N-glyans, and changes to galectins and proteoglycans [22–24] (see Tables 1–3 for more
details). In this review, we discuss the huge potential to exploit glycans as diagnostic and prognostic
biomarkers for prostate cancer, and argue that it will be essential to include glycans as part of a
multi-analyte liquid biopsy test.

2. PSA Glycosylation
     Prostate-specific antigen (PSA) is a glycoprotein enzyme that has been used widely as a biomarker
for prostate cancer, but has the disadvantage of low specificity and no prognostic value at diagnosis [25].
PSA screening for prostate cancer has led to the overdiagnosis and overtreatment of indolent disease,
resulting in unnecessary biopsies and treatments for non-aggressive cancers [26,27]. Refinements on
the PSA test, such as the Prostate Health Index (PHI) and 4Kscore, can improve diagnostic accuracy,
but have limited prognostic utility, and may miss some high-grade cancers [28]. Thus, there is
an urgent clinical need to shift the focus to identifying aggressive disease that needs immediate
treatment [29–31]. Advances in mass spectrometry have led to an increased interest in glycan
structures on cancer-associated proteins, and numerous studies have investigated whether a glycan
signature on PSA can be used to improve its clinical utility [21,24]. A recent study also linked a
single nucleotide polymorphism that affects PSA glycosylation to prostate cancer risk [32]. PSA has
a single N-glycosylation site at asparagine-69 (Asn-69) [24]. Approximately 50 glycoforms of PSA
have been described, but only some of these are found in aggressive prostate cancer. In particular,
complex biantennary glycoforms with α2,3-sialic acid have been closely linked to aggressive disease in
multiple studies [33–35] (Table 1). When combined with the PHI, the detection of α2,3-sialic acid PSA
glycoforms in a cohort of 79 patients showed 100% sensitivity and 94.7% specificity to differentiate
high-risk prostate cancer from low-risk and benign disease [34]. The robust prediction power of
α2,3-sialylated PSA to diagnose aggressive prostate cancer has been confirmed by other studies using
independent cohorts and different technologies [35]. Together, these studies provide strong evidence in
support of the clinical utility of PSA glycoforms to distinguish indolent and aggressive prostate cancer.
Glycans as Biomarkers in Prostate Cancer - MDPI
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3. Sialyled Glycans
     Sialylation is the process by which sialic acid residues are added to glycans as the terminal
monosaccharide. Abnormal sialylation is a universal feature of cancer cells that is linked to poor
prognosis and metastasis [9,36–40]. In prostate cancer, sialic acid levels have been investigated as
an adjunct to PSA in predicting prostate malignancy [41,42]. Increased levels of α2-3-linked sialic
acid have been detected on serum glycoproteins in patients with prostate cancer compared to benign
prostatic hyperplasia (BPH), and can be used to predict Gleason score with a higher specificity and
sensitivity than PSA [43,44]. Serum sialic acid levels have also been linked to pathological grade, and
elevated sialic acid may predict bone metastasis [45]. Together, these studies suggest serum sialic acid
as a promising diagnostic biomarker for prostate cancer that should be further investigated for use in
predicting disease progression.
     An emerging tool for        glycoproteomic
                            Sialylation     is the processanalysis
                                                               by which is      theacid
                                                                            sialic    use      of azide
                                                                                           residues           sugartoanalogs
                                                                                                       are added           glycans asas  themimics
                                                                                                                                              terminal of sialic
                      monosaccharide.
acid. This strategy utilises                  Abnormal sialylation
                                  metabolically            labelledisglycans a universal      feature
                                                                                           with         of cancer reporters
                                                                                                    chemical          cells that is linked
                                                                                                                                       that to  arepoor
                                                                                                                                                      ligated to
                      prognosis and metastasis [9,36–40]. In prostate cancer, sialic acid levels have been investigated as an
fluorescent probes, and       offers     a    new     avenue        for    probing         changes          to   the    glycome
                      adjunct to PSA in predicting prostate malignancy [41,42]. Increased levels of α2-3-linked sialic acid
                                                                                                                                         by   both      imaging
and glycoproteomic have
                      analyses        [24,46].
                             been detected       on In   prostate
                                                     serum               cancer,
                                                               glycoproteins          sialic acid
                                                                                 in patients              analogs
                                                                                                  with prostate          have
                                                                                                                     cancer       been used
                                                                                                                               compared     to benignto identify
                      prostatic hyperplasia (BPH), and can be used to predict Gleason score with a higher specificity and
sialoglycoproteins linked      to metastatic potential in cell lines derived from PC3 cells [47]. More recently,
                      sensitivity than PSA [43,44]. Serum sialic acid levels have also been linked to pathological grade,
sugar azide analogs have       been sialic
                      and elevated      utilised      in prostate
                                                acid may     predict bone  cancer      tissue
                                                                               metastasis          slices
                                                                                               [45].          to identify
                                                                                                      Together,     these studiesglycoproteins
                                                                                                                                      suggest serum that are
elevated or uniquely found in prostate cancer cells [48].
                      sialic  acid   as   a   promising      diagnostic     biomarker        for  prostate     cancer     that  should     be further
                      investigated for use in predicting disease progression.
     As well as changes to       serum sialic acid levels and sialoglycoproteins, tumour-associated sialylated
                            An emerging tool for glycoproteomic analysis is the use of azide sugar analogs as mimics of
glycans also changesialic
                        in prostate           cancer.utilises
                              acid. This strategy           Numerous
                                                                   metabolically studies
                                                                                     labelledhave glycansreported
                                                                                                             with chemical   thereporters
                                                                                                                                   upregulationthat are of the
sialylated blood groupligated   to fluorescent
                             antigen        Sialyl probes,
                                                       Lewis and offers
                                                                   X (SLe      X ) avenue
                                                                           a new    in prostatefor probing     changes
                                                                                                           cancer,      andto the  glycomethis
                                                                                                                                linked         by both
                                                                                                                                                     with poor
                      imaging and glycoproteomic analyses [24,46]. In prostate cancer, sialic acid analogs have been used
prognosis in patients     [49–52]        (Table      1).     SLe    X ,  and     its    isomer         SLe    A ,  are     the   minimal          recognition
                      to identify sialoglycoproteins linked to metastatic potential in cell lines derived from PC3 cells [47].
motif for ligands ofMoreselectins,
                              recently, which
                                           sugar azideis aanalogs
                                                               family haveof beenlectins
                                                                                     utilisedwith         rolescancer
                                                                                                 in prostate        in leukocyte
                                                                                                                           tissue slices to trafficking
                                                                                                                                               identify     and
                      glycoproteins thatXare elevated or uniquely found in prostate cancer cells [48].
tumour extravasation [53].           SLe        could       influence         prostate          cancer       progression
                            As well as changes to serum sialic acid levels and sialoglycoproteins, tumour-associated
                                                                                                                                     through        numerous
mechanisms, including      binding
                      sialylated   glycansto also
                                               E-selectin,        the evasion
                                                    change in prostate                of Natural
                                                                            cancer. Numerous                Killer
                                                                                                      studies   have(NK)
                                                                                                                       reported celltheimmunity,
                                                                                                                                         upregulation and the
                      of the sialylated
promotion of bone metastasis                 blood group
                                      [52,54–56].         Theantigen    Sialyl Lewis Xof
                                                                  upregulation              (SLeSLe   X prostate
                                                                                                  X) in
                                                                                                          has    beencancer,   and linked
                                                                                                                           detected       onthis   withMucin 1
                                                                                                                                                PSA,
                      poor prognosis in patients [49–52] (Table 1). SLeX, and its isomer SLeA, are the minimal recognition
(MUC1), and prostatic     acid
                      motif        phosphatase
                              for ligands                 (PAP)
                                              of selectins,   whichproteins
                                                                        is a family in of a    panel
                                                                                           lectins   with ofroles
                                                                                                               10 malignant            tissues (relative
                                                                                                                    in leukocyte trafficking        and       to
matched normal tissue), opening up a new avenue for the development of prostate cancer-specific
                      tumour     extravasation      [53].  SLe  X could influence prostate cancer progression through numerous

                      mechanisms, including binding to E-selectin, the evasion of Natural Killer (NK) cell immunity, and
glycoprotein biomarkers         [57]. The cancer-associated sialyl-Tn glycan (known as sTn) has also been
                      the promotion of bone metastasis [52,54–56]. The upregulation of SLeX has been detected on PSA,
linked to prostate cancer.
                      Mucin 1sTn       is a and
                                  (MUC1),      truncated         O-glycan
                                                    prostatic acid    phosphatase containing
                                                                                        (PAP) proteins a sialic      acidofα-2,6
                                                                                                             in a panel                 linked
                                                                                                                               10 malignant         to GalNAc
                                                                                                                                                tissues
                      (relative   to matched      normal     tissue),   opening    up    a  new
α-O-Serine/Threonine (Ser/Thr) (Table 1). The sTn glycan is upregulated in several cancer types andavenue     for  the   development      of  prostate
                      cancer-specific glycoprotein biomarkers [57]. The cancer-associated sialyl-Tn glycan (known as sTn)
associated with metastasis
                      has also and       poor toprognosis
                                  been linked                        [37].sTn
                                                      prostate cancer.        Inisprostate
                                                                                     a truncatedcancer,
                                                                                                      O-glycansTn        is expressed
                                                                                                                   containing     a sialic acidinα-2,6
                                                                                                                                                   high-grade
prostate tumours [58,59], and can reduce prostate cancer cell adhesion [60,61]. The sTn antigen
                      linked    to  GalNAc      α-O-Serine/Threonine          (Ser/Thr)     (Table    1).  The    sTn  glycan    is   upregulated     in      is
                      several cancer types and associated with metastasis and poor prognosis [37]. In prostate cancer, sTn
being widely investigated as a circulating biomarker for other cancers [62,63], and it is likely that
                      is expressed in high-grade prostate tumours [58,59], and can reduce prostate cancer cell adhesion
innovative tools that[60,61].
                        wereThe   developed
                                      sTn antigen to       detect
                                                       is being        sTninvestigated
                                                                   widely      [63–65] will           also have
                                                                                               as a circulating         clinical
                                                                                                                     biomarker     forutility     for prostate
                                                                                                                                        other cancers
                      [62,63],
cancer precision oncology.      and  it is  likely that  innovative     tools  that  were    developed      to detect   sTn   [63–65]  will  also  have
                                clinical utility for prostate cancer precision oncology.

                Table 1. Summary of glycan
                                 Table       alterations
                                       1. Summary of glycan in  prostate
                                                            alterations     cancer.
                                                                        in prostate    PSA:
                                                                                    cancer.   prostate-specific
                                                                                            PSA:                       antigen.
                                                                                                 prostate-specific antigen.

                                                     Structure                      Link to Prostate Cancer                                  References
                           Glycan    Glycan                  Structure                 Link to Prostate Cancer                   References
                                Example of N-                                       Complex biantennary glycoforms with α2,3-sialic           [33–35].

                                glycan on PSA                                       acid have been closely linked to aggressive disease in

                                                                                    multiple
                                                                                      Complexstudies.biantennary

                                                                                       glycoforms with
                Example of N-glycan on                                                 α2,3-sialic acid have
                                                                                                                                    [33–35].
                         PSA                                                           been closely linked to
                                                                                       aggressive disease in
                                                                                       multiple studies.

                                                        α2-3 sialylated N-glycan
                                                   α2-3 sialylated N-glycan

                                                                                                                                                         4
Glycans as Biomarkers in Prostate Cancer - MDPI
Sialyl Tn (sTn)                                                                                                Expressed in high-grade prostate tumours. Can                                  [58–61]

Int. J. Mol. Sci. 2019, 20, 1389                                                                                                     reduce prostate cancer cell adhesion.                                     5 of 20

                    Sialyl Lewis X                                                                             Upregulated and linked to poor prognosis in
                                                                                                    Table 1. Cont.                                                                                            [49–52,57].

                    (SLeX) Glycan                                               Structure                                         patients.
                                                                                                                                   Link toDetected onCancer
                                                                                                                                            Prostate  PSA, MUC1 and PAP in
                                                                                                                                                                 References
                             Sialyl Lewis X                                                                                          Upregulated and linked to poor prognosis in                       [49–52,57].
                                                                                                                                  malignant tissue
                             (SLeX)                                                                                                  Upregulated
                                                                                                                                     patients. Detectedand linked
                                                                                                                                                        on PSA, MUC1 and PAP in
                                                                                                                                   to poor prognosis in
                   Sialyl Lewis X (SLeX )                                                                                            patients.tissue
                                                                                                                                     malignant Detected            on               [49–52,57].
                      Core Fucosylation         Sialyl Lewis X                                                                     Increased
                                                                                                                                   PSA,
                                                                                                                Upregulated and linked
                                                                                                                                              MUC1    ininpatient
                                                                                                                                        to poor prognosis         serum.
                                                                                                                                                           and [49–52,57].
                                                                                                                                                                PAP        in Linked to aggressive               [43,66–68]
                    Sialyl Tn (sTn)                                                                                             Expressed in high-grade prostate tumours. Can                                   [58–61]
                                                (SLeX)
                                                                                                                                   malignant tissue
                                                                                                                patients. Detected on PSA, MUC1 and PAP in

                                                                             α3                               α3malignant tissue disease.
                                                                                                                                  reduce prostate cancer cell adhesion.
                             Sialyl Tn (sTn)                                                                                         Expressed in high-grade prostate tumours. Can                          [58–61]
                                                Sialyl Tn (sTn)              β4                               β4
                                                                                                               Expressed in high-grade prostate tumours. Can             [58–61]
                                                         Sialyl Lewis X
                                                                                                                                     Expressed
                                                                                                                                     reduce      incancer
                                                                                                                                     Levelsprostate high-grade
                                                                                                                  Upregulated and linked to poor prognosis in
                                                                                                                                            correlate
                                                                                                                reduce prostate cancer cell adhesion.
                                                                                                                                                              cell
                                                                                                                                                      [49–52,57].
                                                                                                                                                      with          adhesion.
                                                                                                                                                                  Fucosyltransferase 8 (FUT8).                        [69]
                                                         (SLeX)
                                                                             β2                               β2  patients. Detected on PSA, MUC1 and PAP in
                                                                                                                                     prostate tumours. Can
                       Sialyl Tn (sTn)                                                                            malignant tissue                                                      [58–61]
                                                                                                                                     reduce prostate cancer
                                                                                α3                  α6                               cell adhesion.
                                                         Sialyl Tn (sTn)                                          Expressed in high-grade prostate tumours. Can      [58–61]

                                                                                                                  reduce prostate cancer cell adhesion.
                                                                                                    β4
                                                Core Fucosylation                                                                    Increased in patient
                                                                                                                Increased in patient serum. Linked to aggressive
                                                                                                                                                      [43,66–68]

                                                                                  α3
                                                                                                    α6
                                                                                                    α3          disease.             serum. Linked to                                 [43,66–68]
                                                                                  β4        R        β4                              aggressive disease.
                                                                                                                Levels correlate with Fucosyltransferase 8 (FUT8).           [69]
                    Core Fucosylation                                             β2                 β2                           Increased in patient serum. Linked to aggressive                             [43,66–68]
                    Core  Fucosylation
                     O-GlcNAcylation                     Core Fucosylation
                                                                                                                                    Upregulated and[43,66–68]
                                                                                                                                                      linked to poor prognosis in
                                                                                                                  Increased in patient serum. Linked to aggressive
                                                                                                                                                                                                                   [70,71]
                                                                                     α3        α6
                             Core Fucosylation
                                                                                                         α3       disease.
                                                                                                                                      Levels correlate
                                                                                                                                     Increased            with Linked to aggressive
                                                                                                                                               in patient serum.                                       [43,66–68]
                                                                                       α3
                                                                                               β4
                                                                                                          α3                     disease.
                                                                                                                                      Fucosyltransferase                 8                [69]
                                                                           α3          β4                β4                           primary prostate cancer.
                                                                                                               α3Levels correlate withdisease.
                                                                                               α6
                                                                                α3     β2 R              β2                         (FUT8).
                                                                                                                                       Fucosyltransferase 8 (FUT8). [69]

                                                O-GlcNAcylation            β4             α3        α6
                                                                                                          β4 Upregulated and linked to poor prognosis in
                                                                                                                               Downregulated                 [70,71]
                                                                                                                                                         in castrate resistant prostate                               [72]
                                                                                β4                             β4                 Upregulated and linked
                                                                                                    β4                        Levels
                                                                                                                primary prostate cancer. correlate with Fucosyltransferase 8 (FUT8).                                [69]
                                                                           β2                       α6                       to
                                                                                                          β2 Downregulated inLevelspoor         prognosis
                                                                                                                                          correlate
                                                                                                                             castrate resistant prostate
                                                                                                                                                               in
                                                                                                                                                         with Fucosyltransferase
                                                                                                                                                               [72]
                                                                                                                                                                                 8[70,71]
                                                                                                                                                                                   (FUT8).                   [69]
                                                                                β2             R               β2                    cancer(CRPC).
                                                                                                                                     primary  prostate[70,71]cancer.
                     O-GlcNAcylation                     O-GlcNAcylation                                         Upregulated and linked to poor prognosis in
                                                                                                                cancer(CRPC).

                                                                              α3 α3 α6α6                                             Downregulated in
                                                                                                                  primary prostate cancer.

                                                Branched N-                                                                          castrate resistant[72]prostate
                                                                                                                  Downregulated in castrate resistant prostate
                                                                                                                Linked to metastasis and disease-free survival.
                                                                                                                                                            [73]           [72]
                                                glycans                                        β4β4               cancer(CRPC).
                                                                                                                                     cancer(CRPC).
                      Branched N-                                                                                                    Linked to metastasis and disease-free survival.                                  [73]
                                                                                                                Predictive biomarker for CRPC.                               [74]
                                                         Branched N-                           α6α6                                  Linked to metastasis       and
                                                                                                                  Linked to metastasis and disease-free survival.
                                                                                                                                                         [73]
                                                                                                                                                                                   [73]
                      glycans                            glycans
                                          Cryptic N-glycans                            RR                                            disease-free    survival.
                                                                                                                                       N-linked oligomannose 9 (Man9) is increased in                [75]
                   Branched N-glycans                                                                             Predictive biomarker for CRPC.                      [74]

                          O-GlcNAcylation
                    O-GlcNAcylation                                                                                                Upregulated and
                                                                                                                                  Upregulated   and linked
                                                                                                                                                     linked totopoor
                                                                                                                                                                 poor prognosis
                                                                                                                                                                         prognosis in in                    [70,71]
                                                                                                                                                                                                                 [70,71]
                                                                                                                                   Predictive
                                                                                                                                     high-gradebiomarker
                                                                                                                                               tumours      for  CRPC.
                                                                                                                                                        and linked to clinical outcome.                               [74]
                                                                                       Man9                                     Predictive biomarker for
                                                                                                                               primary   prostate  cancer.
                                                                                                                                                                                          [74]
                                      Cryptic N-glycans                                                                 N-linkedCRPC.
                                                                                                                                 oligomannose
                                                                                                                              primary         9 (Man9)
                                                                                                                                         prostate      is increased in
                                                                                                                                                    cancer.                             [75]

                                                                                                                        high-grade tumours and linked
                                                                                                                               Downregulated       in to clinical outcome.
                                                                                                                                                      castrate     resistant        prostate                 [72]
                                                                             Man9
                                                                                                                          Downregulated in castrate resistant prostate                                              [72]
                                                                                                                      Man5 N-linked oligomannose  5
                                                                                                                                                     9
                                                                                                                                     cancer(CRPC).
                                                                                                                                     (Man9) is increasedin
                     Cryptic N-glycans                                                                                            cancer(CRPC).
                                                                                                                                    high-grade tumours 5 and                              [75]
                                                                                                            R
                                                                                                         Man5
                                                                                                                                    linked to clinical
                                                                                                                                    outcome.
                             Branched N-                                                                                             Linked to metastasis and disease-free survival.                         [73]
                                                                                               R
                    Branched N-                                                                                                   Linked to metastasis and disease-free survival.                                   [73]
                             glycans

                    glycans                                                                                                          Predictive biomarker for CRPC.                                          [74]
                                          4. Fucosylation
4. Fucosylation                                                                                                                   Predictive biomarker for CRPC.                                                    [74]
                                               Fucosylation describes the attachment of a fucose residue to a glycan, and consists of terminal
                                      4. Fucosylation
      Fucosylation describes       the attachment
                            fucosylation     and core fucosylation.of a fucose  Increased   residue        to a glycan,
                                                                                              core fucosylation         has beenand
                             Fucosylation describes the attachment of a fucose residue to a glycan, and consists of terminal
                                                                                                                                    detectedconsists       of terminal
                                                                                                                                                  in the serum    of
                                                                                                                                                                             5
                            patients with prostate cancer, is associated with disease progression [43,67,68] (Table 1), and may
fucosylation and core fucosylation.
                       fucosylation
                            influence
                                      and   core
                                          prostate
                                                    Increased
                                                   fucosylation.
                                                       cancer    cell
                                                                          core fucosylation
                                                                     Increased
                                                                        trafficking
                                                                                   core  fucosylation
                                                                                         through      an
                                                                                                         has  has been
                                                                                                              been
                                                                                                           E-selectin
                                                                                                                     detected    detected
                                                                                                                                in
                                                                                                                         dependent
                                                                                                                                    the  serum    of
                                                                                                                                          mechanism
                                                                                                                                                    in the
                                                                                                                                                         [56].
                                                                                                                                                               serum
                                                                                                                                                                The
                                                                                                                                                                        of
                       patients with prostate cancer, is associated with disease progression [43,67,68] (Table 1), and may
patients with prostate      cancer,
                       influence   prostateiscancer
                            fucosyltransferase    associated
                                                      FUT8               with
                                                               is the only
                                                        cell trafficking        enzyme
                                                                             through  disease
                                                                                          anresponsibleprogression
                                                                                              E-selectin                        [43,67,68]
                                                                                                             for the α-1,6-linked
                                                                                                           dependent     mechanism       core The
                                                                                                                                         [56].       (Table that
                                                                                                                                                fucosylation     1), and
                            adds fucose toFUT8
may influence prostate       cancer cellthetrafficking
                       fucosyltransferase            inner    GlcNAc
                                                      is the only    enzymeon N-glycans
                                                                                 responsible[76].
                                                                            through            an     FUT8
                                                                                                 for the      expression
                                                                                                         α-1,6-linked
                                                                                                      E-selectin         coreisfucosylation
                                                                                                                                increased in
                                                                                                                          dependent                high-grade and
                                                                                                                                                that
                                                                                                                                                  mechanism          [56].
                       addsmetastatic
                             fucose to theprostate
                                             inner GlcNAccancer on [73,77].
                                                                     N-glycansThe  [76]. increased      fucosylation
                                                                                          FUT8 expression                 of inglycoproteins
                                                                                                               is increased      high-grade andin aggressive
The fucosyltransferasemetastatic
                         FUT8
                            prostateis  the only
                                     prostate
                                        cancer   cancer   enzyme
                                                           [73,77].
                                                  correlates     withThe   responsible
                                                                         FUT8increased
                                                                                   [69], and       forhasthe
                                                                                            fucosylation
                                                                                                 this       of α-1,6-linked
                                                                                                            been glycoproteins           core
                                                                                                                                  in aggressive
                                                                                                                    recently linked                fucosylation
                                                                                                                                          to castrate   resistance, that
                       prostate
                            cell cancer
                                 survival, correlates   with FUT8
                                               andN-glycans
                                                      lower     PSA [69],     and this [78]
                                                                       production         has been
                                                                                                (Tablerecently   linkedtogether,
                                                                                                         1). Taken       to castratethese
                                                                                                                                        resistance,
                                                                                                                                              findings   implicate and
adds fucose to the inner     GlcNAc
                       cell dysregulated
                                             on
                            survival, and lower        PSA production
                                                                          [76].      FUT8
                                                                             [78] (Table
                                                                                                  expression
                                                                                             1). Taken    together, and
                                                                                                                       is  increased
                                                                                                                      these the
                                                                                                                             findings
                                                                                                                                               in   high-grade
                                                                                                                                         implicate of castrate
                                                fucosylation        in prostate        cancer      progression                     development
metastatic prostate cancer     [73,77].
                       dysregulated
                            resistance.        Thewith
                                         fucosylation
                                           In line      increased
                                                          in prostate cancer
                                                             this, several   fucosylation
                                                                                      progression of    andglycoproteins
                                                                                 fucosylated glycoproteins
                                                                                                              the development ofincastrate
                                                                                                                       are being investigatedaggressive          prostate
                                                                                                                                                      as potential
                       resistance. In line with this, several fucosylated glycoproteins are being investigated as potential
cancer correlates with non-invasive
                        FUT8 [69],
                            non-invasive     and this
                                               predictive
                                        predictive            has been
                                                               biomarkers.
                                                       biomarkers.                recently
                                                                                   These
                                                                       These include               linked
                                                                                             include
                                                                                             decreased          to castrate
                                                                                                         decreased
                                                                                                          fucosylation    on PSA resistance,
                                                                                                                        fucosylation       on   PSA
                                                                                                                                      [33,79] and        cell survival,
                                                                                                                                                       [33,79]  and
                            integrins
                       integrins  [80],  [80],elevated
                                        and     and elevated fucosylated             haptoglobin      [68].
and lower PSA production            [78]     (Tablefucosylated
                                                            1). Taken    haptoglobin      [68].
                                                                                   together,          these findings implicate dysregulated                            5
fucosylation in prostate cancer progression and the development of castrate resistance. In line with
                       5.   5. O-GlcNAcylation
                          O-GlcNAcylation

this, several fucosylatedThe  glycoproteins
                                  The addition
                                 addition    of O-GlcNAc   areto being
                                                     of O-GlcNAc   proteins     investigated
                                                                         to proteins
                                                                               (known      (known
                                                                                          as               as potential
                                                                                                       as O-GlcNAcylation)
                                                                                              O-GlcNAcylation)                    non-invasive
                                                                                                                                    plays a fundamental
                                                                                                                     plays a fundamental        role        predictive
                                                                                                                                                                role
                       in cellular    processes,
                            in cellular              including
                                             processes,             transcription,
                                                              including                 epigenetics,
                                                                               transcription,            cell signalling,
                                                                                                     epigenetics,             proteostasis, proteostasis,
                                                                                                                       cell signalling,         and             and        5
biomarkers. These include          decreased
                       bioenergetics
                            bioenergetics[81,82][81,82]  fucosylation
                                                   (Table (Table
                                                             1). In 1).cancer       on
                                                                             In cells,
                                                                                           PSA
                                                                                   cancerelevated
                                                                                                     [33,79]
                                                                                              cells, pools
                                                                                                       elevated
                                                                                                                   and
                                                                                                                of Uridine integrins
                                                                                                                     pools ofdiphosphate
                                                                                                                                               [80],
                                                                                                                                                 N-
                                                                                                                                   Uridine diphosphate
                                                                                                                                                        and     elevated
                                                                                                                                                                 N-
fucosylated haptoglobinacetylglucosamine
                             [68].
                            acetylglucosamine  (UDP-GlcNAc)
                                                       (UDP-GlcNAc) drive the      O-GlcNAcylation
                                                                               drive                      of key targets
                                                                                        the O-GlcNAcylation                  in the
                                                                                                                        of key         cytoplasm,
                                                                                                                                  targets     in the cytoplasm,
                                      nucleus, and mitochondrion, and can alter key hallmarks of cancer [83,84]. O-GlcNAcylation is
                                           nucleus, and mitochondrion, and can alter key hallmarks of cancer [83,84]. O-GlcNAcylation is
                                      catalysed by O-GlcNAc transferase (OGT) (for more details, see [85]). OGT uses UDP-GlcNAc as a
                                           catalysed by O-GlcNAc transferase (OGT) (for more details, see [85]). OGT uses UDP-GlcNAc as a
                                      substrate, which is produced by the hexosamine biosynthetic pathway (HBP). HBP acts as a sensor
                                           substrate,
                                      for the           which
                                               nutritional stateisofproduced
                                                                     the cell, andbyhas
                                                                                     theahexosamine      biosynthetic
                                                                                           key role in the              pathway
                                                                                                           metabolic rewiring       (HBP).inHBP
                                                                                                                                 observed         acts as a sensor
                                                                                                                                              cancer
                                      [86].for  the nutritional
                                            In primary  prostate state   ofglobal
                                                                   cancer,   the cell,   and has a keyis role
                                                                                    O-GlcNAcylation            in the
                                                                                                          elevated     metabolic
                                                                                                                    relative        rewiring
                                                                                                                             to benign  diseaseobserved
                                                                                                                                                [70],    in cancer
                                      and [86].   In primary
                                            O-GlcNAc    levels prostate
                                                                correlate cancer,    global Gleason
                                                                           with a higher      O-GlcNAcylation      is elevated
                                                                                                       score and reduced         relative
                                                                                                                            patient        to benign
                                                                                                                                     prognosis  [71]. disease [70],
                                      BothandOGTO-GlcNAc
                                                    and enzymeslevels   correlate
                                                                    in the           with a change
                                                                           HBP pathway         higher inGleason
                                                                                                         prostatescore   and
                                                                                                                   cancer.  OGTreduced    patient in
                                                                                                                                  is upregulated   prognosis [71].
                                      primary
                                           Bothprostate
                                                   OGT andcancer,  and thisinis the
                                                               enzymes           linked
                                                                                     HBP to apathway
                                                                                               higher Gleason
                                                                                                        changescore,  reduced time
                                                                                                                 in prostate         to biochemical
                                                                                                                                cancer.  OGT is upregulated in
                                      recurrence,     and increased
                                           primary prostate                c-Myc
                                                                 cancer, and      this stability
                                                                                       is linked [87].    Similarly,
                                                                                                   to a higher  Gleason UDP-N-Acetylglucosamine
                                                                                                                           score, reduced time to biochemical
Int. J. Mol. Sci. 2019, 20, 1389                                                                   6 of 20

5. O-GlcNAcylation
     The addition of O-GlcNAc to proteins (known as O-GlcNAcylation) plays a fundamental
role in cellular processes, including transcription, epigenetics, cell signalling, proteostasis,
and bioenergetics [81,82] (Table 1). In cancer cells, elevated pools of Uridine diphosphate
N-acetylglucosamine (UDP-GlcNAc) drive the O-GlcNAcylation of key targets in the cytoplasm,
nucleus, and mitochondrion, and can alter key hallmarks of cancer [83,84]. O-GlcNAcylation is
catalysed by O-GlcNAc transferase (OGT) (for more details, see [85]). OGT uses UDP-GlcNAc as a
substrate, which is produced by the hexosamine biosynthetic pathway (HBP). HBP acts as a sensor for
the nutritional state of the cell, and has a key role in the metabolic rewiring observed in cancer [86].
In primary prostate cancer, global O-GlcNAcylation is elevated relative to benign disease [70], and
O-GlcNAc levels correlate with a higher Gleason score and reduced patient prognosis [71]. Both
OGT and enzymes in the HBP pathway change in prostate cancer. OGT is upregulated in primary
prostate cancer, and this is linked to a higher Gleason score, reduced time to biochemical recurrence,
and increased c-Myc stability [87]. Similarly, UDP-N-Acetylglucosamine Pyrophosphorylase 1
(UAP1,the last enzyme in the HBP) is also overexpressed in prostate cancer tissue [88]. Although
HBP is upregulated in localised prostate cancer where it promotes disease progression, in advanced
castrate-resistant disease, the inhibition of HBP enhances tumour growth [72]. Metabolic rewiring
during disease progression is believed to promote the downregulation of HBP in castrate-resistant
disease, and in particular, loss of the Glucosamine-Phosphate N-Acetyltransferase 1 (GNPNAT1)
enzyme may serve as a marker of progression to castrate resistance [72].

6. Branched and Cryptic N-Glycans
     Changes to N-glycans are common in cancer, and have been linked to metastasis in multiple
tumour types [89,90]. Common changes include the branching of complex biantennary glycans to
triantennary and tetraantennary structures, and the emergence of cryptic N-glycans [9] (Table 1).
In prostate cancer, β-1,6-GlcNAc tri-branched and tetra-branched N-glycans are linked to both
metastasis in xenograft models and disease-free survival in patients [73]. Serum N-glycan signatures
have shown promise as diagnostic and predictive biomarkers in prostate cancer [91]. Changes to
branched N-glycans can help distinguish BPH and prostate cancer [43,92], and increased serum
triantennary and tetraantennary N-glycans have clinical utility to predict castrate-resistant prostate
cancer [74]. In recent work, a muti-omic study identified tetraantennary and tetrasialylated N-glycans
using mass specrometery as part of a biomarker panel to improve the stratification of patients with
indolent and aggressive prostate cancer, and predict patient survival [10].
     Cryptic N-glycans are the precursors, cores, and internal sequences of N-glycans that are usually
masked by other sugar moieties, but occur in cancer due to alterations in glycan synthesis and
processing [22,93]. As illustrated in Table 1, they contain the same mannose cores, but differ in the
terminal sugar moieties. Cryptic N-glycans expose internal sequences that are normally ‘cryptic’ to
the immune system [94]. Several studies have investigated how cryptic N-glycans change among
different Gleason grades of prostate cancer and in metastatic disease [73,94–96]. Of particular interest,
the cryptic N-glycan Man9 has been detected in the serum of men with prostate cancer, and serum
Man9 autoantibodies may help differentiate high-grade tumours and predict clinical outcome [75].
The further development and validation of assays to detect anti-Man9 antibodies in patient serum is
expected to be useful clinically.

7. The F77 Antigen
      An antibody against the F77 antigen was initially isolated from mice injected with PC3 cells, and
has provoked great interest as a prostate cancer-specific diagnostic and therapeutic tool. F77 was
first identified as a glycolipid with α1,2-fucose linkages, and linked to the glycosylation enzymes
Fucosyltransferase 1 (FUT1) and Core 2 Branching Enzymes 1-3 (GCNT1, GCNT2, and GCNT3) [97–99].
Int. J. Mol. Sci. 2019, 20, 1389                                                                               7 of 20

However, F77 has since been detected on O-glycan proteins, including a spliced isoform of CD44
found in the sera of prostate cancer patients [100]. The antibody against F77 can inhibit the growth of
PC3 and DU145 tumour xenografts in nude mice, and can be used to differentiate primary and
metastatic prostate cancer from non-malignant prostate tissue, [99]. Immunohistochemistry staining
tissue sections detected F77 in 112 of 116 primary and 29 of 34 metastatic prostate cancer tissues, while
no signal was detected in normal prostate tissue [99].

8. Glycolipids
     Many of the glycans found attached to proteins are also found on glycolipids (glycolipids are
lipids modified by one or more glycans). The aberrant expression of glycolipids in cancer has potential
roles in disease progression and anti-tumour immunity (see [101] for more details). In prostate cancer,
the F77 antigen (see Section 7 above) is known to contain a glycolipid with α1,2-fucose linkages, and
preliminary studies have linked increased ganglioside GD1a to castrate-resistant disease [102,103].

9. Proteoglycans
     Proteoglycans are proteins that are heavily glycosylated. The core protein has one or more
glycosaminoglycan (GAG) chains attached (such as chondroitin sulphate, heparin sulphate, or keratin
sulphate). Proteoglycans are a major component of the extracellular matrix and interact with growth
factors, chemokines, and other extracellular matrix proteins. They have roles in cell signalling,
adhesion, cell growth, and apoptosis, and have an established role in cancer progression [104].
Several proteoglycans have been found to be important in prostate cancer, including versican, decorin,
biglycan, lumican, and syndecan-1 (summarised in Table 2), and data from a range of studies implicate
proteoglycan alterations to prostate cancer cell survival and metastasis [105]. Proteoglycan expression
patterns might be useful as predictive and prognostic biomarkers in patients with prostate tumours [22].
Of particular interest, increased levels of versican [106], biglycan [107], and syndecan-1 [108,109] are
linked to poor prognosis.

                                    Table 2. Proteoglycans with roles in prostate cancer.

          Proteoglycan                            Link to Prostate Cancer                       References
                                   Modulates binding to the extracellular matrix (ECM) and
             Versican                                enhances motility.                        [106,110–112]
                                              Associated with poor prognosis.
                                   Suppresses tumour growth by inhibiting both androgen
             Decorin                 receptor (AR) and epidermal growth factor (EGF).          [106,113,114]
                                                Decreased in prostate cancer.
             Biglycan               Associated with poor prognosis and PTEN deletion.              [107]
                                   Lumican in stroma tissue suppresses cancer progression.
             Lumican                                                                               [115]
                                        Potential marker in prostate cancer staging.
                                      Linked to disease progression. Upregulates sonic
             Perlecan                                                                            [116,117]
                                                    hedgehog signalling.
                                   Role in the epithelial-to-mesenchymal transition (EMT).
                                                                                                 [118,119]
           Syndecan-1               Maintains stability of prostate tumour initiating cells.
                                                       Poor prognosis.                           [108,109]

10. Galectins
     Cancer cells may also display altered expression of proteins that interact with glycans. A key
example of this is the galectins, which are a group of glycan-binding proteins with an established
role in tumour biology [120]. Several galectins have been implicated in prostate cancer biology
(summarised in Table 3). A unique galectin signature has been identified in prostate cancer tissue, with
Int. J. Mol. Sci. 2019, 20, 1389                                                                             8 of 20

the upregulation of galectin-1 and downregulation of galectins 3, 4, 9, and 12 observed during disease
progression [121]. Of particular interest, galectin-3 is linked to tumour progression [122] and has a role
in the prostate cancer bone metastasis niche [123]. Immunohistochemistry staining of galectin-3 in
tissues from 83 patients had 91.7% sensitivity, 64% specificity, and 73% accuracy in predicting PSA
biochemical recurrence [124].

                                        Table 3. Galectins with roles in prostate cancer.

         Galectin                                  Link to Prostate Cancer                      References
                             Upregulated during disease progression. Linked to angiogenesis.       [121]
         Galectin-1
                                             Potential therapeutic target in CRPC.               [125,126]
                                       Promotes prostate tumour growth and invasion.
                                                                                                   [127]
                                                Potential diagnostic marker.
         Galectin-3                      High in early stages, lost in advanced disease.
                                                                                                 [123,124]
                                             May predict biochemical recurrence.
                                                Role in bone metastasis niche.                     [122]
                                          Linked to metastasis and reduced survival.               [128]
         Galectin-4                Part of O-glycosylation-mediated signalling circuit drives
                                                                                                   [129]
                                                       metastatic CRPC.
         Galectin-8                Linked to metastasis. Proposed as prognostic biomarker.         [130]

11. Upregulation of Glycosylation Enzymes
      One of the underlying causes of aberrant glycosylation in cancer is the dysregulated expression of
glycosylation enzymes within the cancer cell [16]. Growing evidence links the differential expression of
glycosylation enzymes to the progression of prostate cancer [57,78,88,131–136] (summarised in Table 4).
Androgens are known to drive the development and progression of prostate cancer, and the first
line of treatment for men with advanced disease is androgen deprivation therapy (ADT) [137].
Recently, we identified a set of glycosylation enzymes that were regulated by androgens both in
seven men undergoing ADT, and in prostate cancer cell lines. Importantly, these enzymes are linked to
prostate cancer cell survival, and are upregulated in primary prostate cancer relative to normal and
benign tissue [131,132]. The androgen-regulated glycosylation enzymes in prostate cancer include:
(i) ST6GalNac1, which synthesises the cancer-associated sTn antigen, (ii) GCNT1, which is linked to
the synthesis of sLeX , (iii) GalNAc transferase 7 (GALNT7), which is part of a gene signature associated
with androgen receptor splice variant-7 (AR-V7), and (iv) the HBP enzyme UAP1, which is highly
overexpressed in prostate cancer [57,60,88,132,138]. Several cancer-associated glycans, including sTn,
Tn, and sLeX are also androgen regulated in prostate cancer cell lines [132], but this is yet to be studied
in primary patient tissue. Preliminary studies have found that GCNT1 can be detected in post-digital
rectal examination (post-DRE) urine from 35 prostate cancer patients by immunoblotting, and used
to predict the extracapsular extension of prostate cancer (the receiver operating characteristic (ROC)
curve analysis for GCNT1 was 0.7614, compared to 0.7455 for PSA) [139]. The UAP1 gene can also
be detected in plasma and urine, and can be used as part of a gene panel to predict prostate biopsy
results and prognosis [140,141]. Altered expression of the fucosyltransferases FUT6 and FUT8 are
important in advanced prostate cancer. FUT6 is upregulated in distant metastases, and may play a role
in metastasis to bone [136]. FUT8 expression increases in aggressive and castrate-resistant prostate
cancer, and is linked to poor prognosis in patients (these studies were based on cell lines, and a small
number of tissue samples and will need repeating in additional larger cohorts) [77,78]. Taken together,
these studies suggest that glycosylation enzymes are a promising but yet unexploited resource of
diagnostic and prognostic biomarkers for prostate cancer, and may also provide new insights into
candidate glycoprotein alterations.
Int. J. Mol. Sci. 2019, 20, 1389                                                                                      9 of 20

      Table 4. Summary of glycosylation enzymes with roles in prostate cancer. HBP: hexosamine
      biosynthetic pathway.

     Glycosylation
                              Role in Glycosylation                 Link to Prostate Cancer              References
       Enzyme
                                                            Regulated by androgens. Upregulated in
                             Transfers α-2,6 sialic acid
    ST6GALNAC1                                              tumour tissue. Linked to the synthesis of    [60,61,142]
                               to O-linked GalNAc
                                                                  sTn. Reduced cell adhesion
                                                            Increased in aggressive disease. Closely
                                                             related to extraprostatic extension and
                                                           lymph node metastasis. Increases tumour        [133,134]
                                                           growth on orthotopic inoculation into the
                                                                         mouse prostate.
                              Forms core-2-branched             Resistance to NK cell immunity.             [52]
         GCNT1
                                 O-linked glycans                   Regulated by androgens                  [132]
                                                            Associated with higher levels of core 2 O
                                                                                                            [57]
                                                                 sLex in PSA, PAP, and MUC1
                                                                     Linked to F77 antigen.                 [97]
                                                            Detected in post-DRE urine. Indicator of
                                                                                                            [139]
                                                                    extracapsular extension
                              Forms core-2-branched           Linked to invasion. Potential role in
         GCNT2                                                                                              [143]
                                 O-linked glycans                     integrin signalling.
                                                           Upregulated in malignant PCa as part of a
                                                                                                            [144]
                                                                glycosylation gene signature.
                                     Initiation of
        GALNT7                                             Androgen regulated and linked to prostate
                                    O-glycosylation
                                                                                                            [132]
                                                                     cancer cell viability.
                                                                Correlates with AR-V7 in CRPC.              [138]
                                                           Part of O-glycosylation mediated signalling
                              Generates the common
       C1GALT1                                              circuit that drives CRPC and is linked to       [129]
                             core 1 O-glycan structure
                                                                          poor survival.

                             Addition of sialic acid to    Upregulated. Linked to reduced survival
                                                                                                            [135]
        ST6Gal1               galactose-containing                    and metastasis.
                                    N-glycan                        Regulated by androgens.                 [132]
                                                           Upregulated in malignant prostate cancer
                                                                                                            [144]
                              Mannose trimming of          as part of a glycosylation gene signature.
         EDEM3
                                  N-glycans
                                                           Androgen regulated and linked to prostate
                                                                                                            [132]
                                                                     cancer cell viability.
                               Biosynthesis of β1,6
        MGAT5                   GlcNAc-branched               Link to metastasis in mouse models.           [145]
                                    N-glycans
                                                           Highly overexpressed (correlates negatively
                               Last enzyme in HBP           with Gleason score). Linked to increased
          UAP1                 pathway. Produces           UDP-GlcNAc. Protects prostate cancer cells       [88]
                                  UDP-GlcNAc                from endoplasmic reticulum (ER) stress.
                                                                   Regulated by androgens.
                             HBP pathway. Produces
       GNPNAT1                                                 GNPNAT1 is decreased in CRPC.                [72]
                                 UDP-GlcNAc
                                                           Upregulated in distant metastases. Role in
          FUT6                        Fucosylation                                                          [136]
                                                              prostate cancer metastasis to bone.

                                   Transfers fucose to     Increased in aggressive prostate cancer and
                                                                                                            [77]
          FUT8                     core-GlcNAc of the               linked to poor prognosis.
                                       N-glycans                      Increased in CRPC.                    [78]
Int. J. Mol. Sci. 2019, 20, 1389                                                                    10 of 20

12. Exosomes
     Exosomes are small vesicles secreted from most cell types that are present in body fluids.
There is increasing evidence that exosomes are involved in carcinogenesis, and they are emerging as
a rich source of tumour-specific proteins and biomarkers for cancer detection and progression [146].
Exosomes secreted by the prostate are structurally unique, and can be isolated from seminal fluid, tissue,
blood, or urine for further analyses, providing a novel and easily isolatable source of tumour-specific
proteins [147]. Glycans are important in exosome function [148]. A recent review discussed the
potential to exploitexosomes as powerful tools to diagnose aggressive prostate cancer as early as
possible, as well as predict patient prognosis and response to treatment [149]. Exosomes are a rich
source of glycans [23,150], but are still largely unexplored in prostate cancer. The profiling of N-linked
glycans from prostate cancer exosomes indicates a global decrease in large branched triantennary and
tetraantennary glycans that reflects clinical status [151]. A better understanding of the presence of
glycoproteins and glycan profiles of exosomes could improve current approaches of diagnosis and
prognosis. As discussed by Tkac et al., glycan markers are likely to be enriched in exosomes, which
will aid in assay design [23].

13. Tissue Imaging of Glycans
     Changes to glycans can be profiled in clinically relevant tissues using recently developed
innovative approaches. A sialyltransferase-based chemoenzymatic histology assay can detect
differences between unsialylated glycans in normal, cancerous, and metastatic prostate tissue
sections [152], and bioorthoganol labelling has been used to identify sialoglycoproteins in prostate
cancer tissue slices [48]. Advances in imaging mass spectrometry mean that glycans can now be
identified directly on patient tissue, allowing for analysis of the spatial distribution of glycans.
N-glycans can be profiled on formalin-fixed paraffin embedded (FFPE) tissue samples and tissue
microarrays (TMAs) using matrix-assisted laser desorption/ionization imaging mass spectrometry
(MALDI-IMS) [24,153–155]. In this recently developed approach, glycans are released from their
protein carrier and analysed directly on tissue. More than 40 individual glycan structures can be
detected, and tumour-specific glycans can be grouped relative to histopathology localisations [155].
A major advantage of MALDI-MS imaging is that the best starting material is FFPE tissue, which
is widely available in pathology labs. Ongoing work in this emerging area aims to identify
tumour-specific glycan biomarker panels indicative of aggressive prostate cancer, as well as identify
a second tier of biomarkers by linking glycans back to their original glycoprotein carriers [23]. It is
hoped that information on the various types of glycans within cancer tissue can be used in the future
to enable the development of lectin-based assays for use in the pathology lab [155].

14. A Multi-Omic Liquid Biopsy Test
     The development and progression of prostate cancer from localised, organ-confined disease to
biochemically progressive and then to metastasis is prolonged. To capture this evolving landscape,
serial tissue biopsies are needed, which is difficult and costly to execute in the clinic. In addition,
prostate cancer preferentially metastasises to bone, which is a site that is very difficult to sample.
Tumour heterogeneity can also lead to aggressive tumours being missed, or underestimation of the
tumour landscape [156]. Liquid biopsies offer a potential solution to overcome the practical and
technical challenges of the traditional tissue biopsy [157]. The concept of a ‘liquid biopsy’ relies on the
principle that cancer cells are shed directly into blood, urine, and other body fluids. These cancer cells
can be captured and used to derive information to improve diagnosis, prognosis, or treatment. Liquid
biopsies may also capture a more complete representation of a cancer, which encompasses tumour
heterogeneity [158].
Int. J. Mol. Sci. 2019, 20, 1389                                                                                11 of 20

     Flow cytometery techniques were able to detect circulating prostate cancer cells in men
with metastatic disease as early as the 1970s [159]. Today, technologies can use bodily fluids to
profile genomic mutations, copy number alterations, and obtain information about the tumour
transcriptome, epigenome, proteome, metabalome, and glycome. Among prostate cancer liquid
biopsies, circulating tumours cells (CTCs) are the most extensively evaluated biomarkers [160], but
other clinically relevant phenotypes have also shown promise. These include detection of the androgen
receptor variant V7 (AR-V7) [161], circulating miRNAs [162–164], TMPRSS2:ERG, and prostate cancer
antigen 3 (PCA3) [165–167], circulating free DNA (cfDNA) (reviewed in [158]), detection of gene
methylation [168,169], and the analysis of tumour-derived exosomes [170].
     Individual biomarkers in liquid biopsy can often not accurately predict disease state due to
heterogeneity in phenotype across individuals and over time. To address this challenge, effective
diagnostics using liquid biopsies will require multiparameter strategies to combine information from
multiple analytes. A recent study by Murphy et al. suggested that integrating biomarkers across
multi-omic platforms (including changes to the epigenome, transcriptome, proteome, and glycome)
can improve the stratification of patients with prostate cancer [10]. By the analysis of four types of
DNA methylation, four coding and nine non-coding RNAs, 27 peptides, and 13 glycans (in a cohort of
158 radical prostatectomy patients), combined with clinical parameters, it was possible to effectively
distinguish indolent and aggressive prostate cancer with area under the ROC curve (AUC) = 0.91 (age,
PSA level, Gleason score, and DRE gave an AUC of 0.67). This strongly suggests that multivariate
models (built from different -omics data) will lead to superior accuracy over individual markers for
prostate cancer diagnosis and disease stratification [10], and together with the data discussed in this
review, clearly demonstrate that the inclusion of glycans in a multi-analyte liquid biopsy test for
prostate cancer should help improve clinical utility.

15. Conclusions and Future Perspectives
      Glycans contribute to many aspects of prostate cancer, and likely represent a huge and largely
untapped resource of biomarkers with clinical utility. The summary provided by this review suggests
that glycan-based biomarkers should be exploited as powerful tools to diagnose prostate cancer as
soon as possible, and to accurately determine tumour aggressiveness and patient prognosis. Liquid
biopsies hold great potential as non-invasive assays to monitor tumour heterogeneity and evolution,
and select personalised therapy. As new markers are identified, their clinical impact must be translated
through assay development, followed by clinical reproducibility and sensitivity testing [171]. These
efforts raise new biological and technical challenges [158,172], yet constitute critical steps towards
precision oncology. The ultimate goal in the field will be to clinically validate several types of molecules,
including glycans, within a multi-analyte liquid biopsy test. Furthermore, looking towards the future,
artificial intelligence-based tools may be useful to automatically discover and detect these signatures
and move the field towards multiparametric analyses [173]. Alongside this, the development of
novel glycan-targeting drugs (for examples, see [174–179]) will likely lead to new personalised
glycan-based therapies.

Funding: This work was supported by Prostate Cancer UK through a Research Innovation Award (RIA16-ST2-011).
Conflicts of Interest: The authors declare no conflict of interest.

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